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    Slc25a11 solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11 [ Mus musculus (house mouse) ]

    Gene ID: 67863, updated on 9-Sep-2018

    Summary

    Official Symbol
    Slc25a11provided by MGI
    Official Full Name
    solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11provided by MGI
    Primary source
    MGI:MGI:1915113
    See related
    Ensembl:ENSMUSG00000014606 Vega:OTTMUSG00000006069
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2oxoc; 2310022P18Rik
    Expression
    Ubiquitous expression in heart adult (RPKM 208.5), kidney adult (RPKM 85.6) and 27 other tissues See more
    Orthologs

    Genomic context

    See Slc25a11 in Genome Data Viewer
    Location:
    11 B3; 11 43.21 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 11 NC_000077.6 (70644019..70647423, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (70457698..70460495, complement)

    Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene predicted gene 12315 Neighboring gene glycoprotein 1b, alpha polypeptide Neighboring gene ring finger protein 167 Neighboring gene profilin 1 Neighboring gene enolase 3, beta muscle

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    oxoglutarate:malate antiporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrial inner membrane HDA PubMed 
    mitochondrion HDA PubMed 

    General protein information

    Preferred Names
    mitochondrial 2-oxoglutarate/malate carrier protein
    Names
    OGCP
    solute carrier family 25 member 11

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_024211.3NP_077173.1  mitochondrial 2-oxoglutarate/malate carrier protein

      See identical proteins and their annotated locations for NP_077173.1

      Status: VALIDATED

      Source sequence(s)
      AI196845, AI931249, AK009487, BY006289
      Consensus CDS
      CCDS24958.1
      UniProtKB/Swiss-Prot
      Q9CR62
      UniProtKB/TrEMBL
      Q5SX53
      Related
      ENSMUSP00000014750.8, OTTMUSP00000006344, ENSMUST00000014750.14, OTTMUST00000013683
      Conserved Domains (1) summary
      pfam00153
      Location:24102
      Mito_carr; Mitochondrial carrier protein

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000077.6 Reference GRCm38.p4 C57BL/6J

      Range
      70644019..70647423 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006534026.1XP_006534089.1  mitochondrial 2-oxoglutarate/malate carrier protein isoform X1

      See identical proteins and their annotated locations for XP_006534089.1

      Conserved Domains (1) summary
      pfam00153
      Location:84181
      Mito_carr; Mitochondrial carrier protein

    Reference GRCm38.p4 NOD/MrkTac

    Genomic

    1. NT_187026.1 Reference GRCm38.p4 NOD/MrkTac

      Range
      749516..752536 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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