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    Ilf2 interleukin enhancer binding factor 2 [ Mus musculus (house mouse) ]

    Gene ID: 67781, updated on 2-Oct-2018

    Summary

    Official Symbol
    Ilf2provided by MGI
    Official Full Name
    interleukin enhancer binding factor 2provided by MGI
    Primary source
    MGI:MGI:1915031
    See related
    Ensembl:ENSMUSG00000001016 Vega:OTTMUSG00000052750
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tex261; Tex267; TEG-267; 6230405A16Rik
    Expression
    Broad expression in CNS E11.5 (RPKM 75.1), CNS E14 (RPKM 54.2) and 22 other tissues See more
    Orthologs

    Genomic context

    See Ilf2 in Genome Data Viewer
    Location:
    3; 3 F1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 3 NC_000069.6 (90476201..90488379)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (90280123..90292301)

    Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene natriuretic peptide receptor 1 Neighboring gene nuclear encoded tRNA methionine 11 (anticodon CAT) Neighboring gene SNAP-associated protein Neighboring gene chromatin target of PRMT1 Neighboring gene S100 calcium binding protein A1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    DNA binding ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    double-stranded RNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    immune response IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of transcription, DNA-templated ISO
    Inferred from Sequence Orthology
    more info
     
    transcription, DNA-templated ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    nucleolus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    ribonucleoprotein complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    interleukin enhancer-binding factor 2
    Names
    nuclear factor of activated T-cells 45 kDa
    testis expressed gene 267

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026374.3NP_080650.1  interleukin enhancer-binding factor 2

      See identical proteins and their annotated locations for NP_080650.1

      Status: PROVISIONAL

      Source sequence(s)
      AC160552
      Consensus CDS
      CCDS17530.1
      UniProtKB/Swiss-Prot
      Q9CXY6
      Related
      ENSMUSP00000001042.8, OTTMUSP00000070478, ENSMUST00000001042.9, OTTMUST00000132072
      Conserved Domains (1) summary
      smart00572
      Location:98338
      DZF; domain in DSRM or ZnF_C2H2 domain containing proteins

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000069.6 Reference GRCm38.p4 C57BL/6J

      Range
      90476201..90488379
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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