Format

Send to:

Choose Destination
    • Showing Current items.

    Ost4 oligosaccharyltransferase complex subunit 4 (non-catalytic) [ Mus musculus (house mouse) ]

    Gene ID: 67695, updated on 27-Jan-2018

    Summary

    Official Symbol
    Ost4provided by MGI
    Official Full Name
    oligosaccharyltransferase complex subunit 4 (non-catalytic)provided by MGI
    Primary source
    MGI:MGI:1914945
    See related
    Ensembl:ENSMUSG00000038803 Vega:OTTMUSG00000022351
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2310016E02Rik
    Expression
    Ubiquitous expression in placenta adult (RPKM 157.9), genital fat pad adult (RPKM 151.7) and 28 other tissues See more
    Orthologs

    Genomic context

    See Ost4 in Genome Data Viewer
    Location:
    5; 5 B1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 5 NC_000071.6 (30906516..30907810, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (31208891..31210161, complement)

    Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 35795 Neighboring gene nuclear encoded tRNA alanine 15 (anticodon AGC) Neighboring gene nuclear encoded tRNA tyrosine 9 (anticodon GTA) Neighboring gene ATP/GTP binding protein-like 5 Neighboring gene elastin microfibril interfacer 1 Neighboring gene ketohexokinase

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4
    Names
    oligosaccharyltransferase 4 homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001134692.2NP_001128164.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4

      See identical proteins and their annotated locations for NP_001128164.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) represents the longer transcript. Variants 1 and 2 encode the same protein.
      Source sequence(s)
      BC082316, BU756604, DV041491
      Consensus CDS
      CCDS39049.1
      UniProtKB/Swiss-Prot
      Q99LX8
      Related
      ENSMUSP00000126221.1, OTTMUSP00000051208, ENSMUST00000132034.4, OTTMUST00000053337
      Conserved Domains (1) summary
      pfam10215
      Location:134
      Ost4; Oligosaccaryltransferase
    2. NM_024460.4NP_077780.3  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4

      See identical proteins and their annotated locations for NP_077780.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) differs in the 5' UTR compared to variant 2. Variants 1 and 2 encode the same protein.
      Source sequence(s)
      AK003569, BU756604, DV041491
      Consensus CDS
      CCDS39049.1
      UniProtKB/Swiss-Prot
      Q99LX8
      Related
      ENSMUSP00000128352.1, OTTMUSP00000051207, ENSMUST00000132253.4, OTTMUST00000053336
      Conserved Domains (1) summary
      pfam10215
      Location:134
      Ost4; Oligosaccaryltransferase

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000071.6 Reference GRCm38.p4 C57BL/6J

      Range
      30906516..30907810 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006504071.3XP_006504134.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 isoform X1

      See identical proteins and their annotated locations for XP_006504134.1

      UniProtKB/Swiss-Prot
      Q99LX8
      Conserved Domains (1) summary
      pfam10215
      Location:134
      Ost4; Oligosaccaryltransferase
    Support Center