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    Gstcd glutathione S-transferase, C-terminal domain containing [ Mus musculus (house mouse) ]

    Gene ID: 67553, updated on 23-Jun-2021

    Summary

    Official Symbol
    Gstcdprovided by MGI
    Official Full Name
    glutathione S-transferase, C-terminal domain containingprovided by MGI
    Primary source
    MGI:MGI:1914803
    See related
    Ensembl:ENSMUSG00000028018
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4933434L15Rik
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 7.0), testis adult (RPKM 6.2) and 27 other tissues See more
    Orthologs
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    Genomic context

    See Gstcd in Genome Data Viewer
    Location:
    3; 3 G3
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (132687511..132797800, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (132981750..133092039, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (132645514..132754704, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 29811 Neighboring gene heat shock protein 90 alpha (cytosolic), class B member 1 pseudogene Neighboring gene nephronectin Neighboring gene predicted gene, 23196 Neighboring gene TIP41, TOR signalling pathway regulator-like pseudogene Neighboring gene integrator complex subunit 12 Neighboring gene Rho guanine nucleotide exchange factor (GEF) 38 Neighboring gene predicted gene, 52616 Neighboring gene pyrophosphatase (inorganic) 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    General gene information

    Homology

    Clone Names

    • MGC74393

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    glutathione S-transferase C-terminal domain-containing protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001356309.1NP_001343238.1  glutathione S-transferase C-terminal domain-containing protein

      Status: VALIDATED

      Source sequence(s)
      AC124593, BC061240
      Consensus CDS
      CCDS17847.1
      Related
      ENSMUSP00000079421.6, ENSMUST00000080583.6
      Conserved Domains (2) summary
      cl02776
      Location:271330
      GST_C_family; C-terminal, alpha helical domain of the Glutathione S-transferase family
      cl17173
      Location:424542
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    2. NM_026231.3NP_080507.2  glutathione S-transferase C-terminal domain-containing protein

      See identical proteins and their annotated locations for NP_080507.2

      Status: VALIDATED

      Source sequence(s)
      AC124593, BC047136, BY740821
      Consensus CDS
      CCDS17847.1
      UniProtKB/Swiss-Prot
      Q5RL51
      Related
      ENSMUSP00000029651.5, ENSMUST00000029651.11
      Conserved Domains (2) summary
      cl02776
      Location:271330
      GST_C_family; C-terminal, alpha helical domain of the Glutathione S-transferase family
      cl17173
      Location:424542
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      132687511..132797800 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_003954372.2 RNA Sequence

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