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    Mtfr1 mitochondrial fission regulator 1 [ Mus musculus (house mouse) ]

    Gene ID: 67472, updated on 23-May-2018

    Summary

    Official Symbol
    Mtfr1provided by MGI
    Official Full Name
    mitochondrial fission regulator 1provided by MGI
    Primary source
    MGI:MGI:1914722
    See related
    Ensembl:ENSMUSG00000027601 Vega:OTTMUSG00000027795
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Chppr; Fam54a2; 1300002C08Rik; 1700080D04Rik; 2810026O10Rik; 4930579E05Rik
    Expression
    Broad expression in testis adult (RPKM 71.8), liver E14 (RPKM 19.6) and 20 other tissues See more
    Orthologs

    Genomic context

    See Mtfr1 in Genome Data Viewer
    Location:
    3; 3 A2
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 3 NC_000069.6 (19187314..19220817)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (19088244..19120805)

    Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 30341 Neighboring gene armadillo repeat containing 1 Neighboring gene phosphodiesterase 7A Neighboring gene predicted gene, 42188

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    aerobic respiration IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    aerobic respiration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    mitochondrial fission IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrion HDA PubMed 
    mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    mitochondrial fission regulator 1
    Names
    chondrocyte protein with a poly-proline region

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001253390.2NP_001240319.1  mitochondrial fission regulator 1

      See identical proteins and their annotated locations for NP_001240319.1

      Status: VALIDATED

      Source sequence(s)
      AC127283, AK004846, AK006952, AK161251, BY429681
      Consensus CDS
      CCDS17256.1
      UniProtKB/Swiss-Prot
      Q99MB2
      UniProtKB/TrEMBL
      Q3TTQ5
      Related
      ENSMUSP00000112752.1, OTTMUSP00000034841, ENSMUST00000119865.7
      Conserved Domains (1) summary
      pfam05308
      Location:24249
      Mito_fiss_reg; Mitochondrial fission regulator
    2. NM_001253391.2NP_001240320.1  mitochondrial fission regulator 1

      See identical proteins and their annotated locations for NP_001240320.1

      Status: VALIDATED

      Source sequence(s)
      AC127283, AK004846, AK006952, BY429681
      Consensus CDS
      CCDS17256.1
      UniProtKB/Swiss-Prot
      Q99MB2
      UniProtKB/TrEMBL
      Q3TTQ5
      Related
      ENSMUSP00000112824.1, OTTMUSP00000034840, ENSMUST00000117529.7
      Conserved Domains (1) summary
      pfam05308
      Location:24249
      Mito_fiss_reg; Mitochondrial fission regulator
    3. NM_001356295.1NP_001343224.1  mitochondrial fission regulator 1

      Status: VALIDATED

      Source sequence(s)
      AC127283, BY429681
      Conserved Domains (1) summary
      pfam05308
      Location:24249
      Mito_fiss_reg; Mitochondrial fission regulator
    4. NM_026182.6NP_080458.1  mitochondrial fission regulator 1

      See identical proteins and their annotated locations for NP_080458.1

      Status: VALIDATED

      Source sequence(s)
      AC127283, AK004846, BY143181, BY429681
      Consensus CDS
      CCDS17256.1
      UniProtKB/Swiss-Prot
      Q99MB2
      UniProtKB/TrEMBL
      Q3TTQ5
      Related
      ENSMUSP00000119724.1, OTTMUSP00000034839, ENSMUST00000130645.7
      Conserved Domains (1) summary
      pfam05308
      Location:24249
      Mito_fiss_reg; Mitochondrial fission regulator

    RNA

    1. NR_045575.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC127283, AK004846, BY143181, BY429681, CK625955

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000069.6 Reference GRCm38.p4 C57BL/6J

      Range
      19187314..19220817
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011249708.2XP_011248010.1  mitochondrial fission regulator 1 isoform X1

      See identical proteins and their annotated locations for XP_011248010.1

      UniProtKB/Swiss-Prot
      Q99MB2
      UniProtKB/TrEMBL
      Q3TTQ5
      Conserved Domains (1) summary
      pfam05308
      Location:24249
      Mito_fiss_reg; Mitochondrial fission regulator
    2. XM_006535526.2XP_006535589.1  mitochondrial fission regulator 1 isoform X1

      UniProtKB/Swiss-Prot
      Q99MB2
      UniProtKB/TrEMBL
      Q3TTQ5
      Conserved Domains (1) summary
      pfam05308
      Location:24249
      Mito_fiss_reg; Mitochondrial fission regulator
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