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    Gpalpp1 GPALPP motifs containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 67467, updated on 23-Jun-2021

    Summary

    Official Symbol
    Gpalpp1provided by MGI
    Official Full Name
    GPALPP motifs containing 1provided by MGI
    Primary source
    MGI:MGI:1914717
    See related
    Ensembl:ENSMUSG00000022008
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Kiaa1704; 1200011I18Rik
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 4.6), bladder adult (RPKM 4.4) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Gpalpp1 in Genome Data Viewer
    Location:
    14; 14 D3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (76323672..76348255, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (76086232..76110815, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (76486039..76510622, complement)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene general transcription factor IIF, polypeptide 2 Neighboring gene predicted gene, 36429 Neighboring gene predicted gene, 36477 Neighboring gene nuclear fragile X mental retardation protein interacting protein 1 Neighboring gene nuclear encoded tRNA glutamic acid 6 (anticodon TTC)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    GPALPP motifs-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026177.3NP_080453.2  GPALPP motifs-containing protein 1

      See identical proteins and their annotated locations for NP_080453.2

      Status: VALIDATED

      Source sequence(s)
      AC125128, AK016681, AK033528, AK082912
      Consensus CDS
      CCDS27283.1
      UniProtKB/Swiss-Prot
      Q69ZC8
      UniProtKB/TrEMBL
      Q9D4A1
      Related
      ENSMUSP00000022585.4, ENSMUST00000022585.5
      Conserved Domains (1) summary
      pfam12572
      Location:210338
      DUF3752; Protein of unknown function (DUF3752)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      76323672..76348255 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036158828.1XP_036014721.1  GPALPP motifs-containing protein 1 isoform X1

      Conserved Domains (1) summary
      pfam12572
      Location:47183
      DUF3752; Protein of unknown function (DUF3752)
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