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    Frmd8 FERM domain containing 8 [ Mus musculus (house mouse) ]

    Gene ID: 67457, updated on 13-Nov-2018

    Summary

    Official Symbol
    Frmd8provided by MGI
    Official Full Name
    FERM domain containing 8provided by MGI
    Primary source
    MGI:MGI:1914707
    See related
    Ensembl:ENSMUSG00000024816 Vega:OTTMUSG00000033946
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    iTAP; AU018809; 1200004M23Rik; 2310035N23Rik; 4931429L16Rik
    Expression
    Ubiquitous expression in thymus adult (RPKM 47.8), small intestine adult (RPKM 26.9) and 28 other tissues See more
    Orthologs

    Genomic context

    See Frmd8 in Genome Data Viewer
    Location:
    19; 19 A
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 19 NC_000085.6 (5850974..5875273, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (5850974..5875208, complement)

    Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) Neighboring gene nuclear paraspeckle assembly transcript 1 (non-protein coding) Neighboring gene FERM domain containing 8, opposite strand Neighboring gene solute carrier family 25, member 45 Neighboring gene tigger transposable element derived 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    FERM domain-containing protein 8

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026169.4NP_080445.1  FERM domain-containing protein 8

      See identical proteins and their annotated locations for NP_080445.1

      Status: PROVISIONAL

      Source sequence(s)
      AK083902
      Consensus CDS
      CCDS29481.1
      UniProtKB/Swiss-Prot
      Q3UFK8
      Related
      ENSMUSP00000025728.6, OTTMUSP00000046290, ENSMUST00000025728.12, OTTMUST00000085648
      Conserved Domains (2) summary
      smart00295
      Location:32273
      B41; Band 4.1 homologues
      pfam00373
      Location:137273
      FERM_M; FERM central domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000085.6 Reference GRCm38.p4 C57BL/6J

      Range
      5850974..5875273 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006531829.3XP_006531892.1  FERM domain-containing protein 8 isoform X2

      Conserved Domains (2) summary
      smart00295
      Location:32273
      B41; Band 4.1 homologues
      pfam00373
      Location:137273
      FERM_M; FERM central domain
    2. XM_006531828.2XP_006531891.1  FERM domain-containing protein 8 isoform X1

      See identical proteins and their annotated locations for XP_006531891.1

      UniProtKB/Swiss-Prot
      Q3UFK8
      Conserved Domains (2) summary
      smart00295
      Location:32273
      B41; Band 4.1 homologues
      pfam00373
      Location:137273
      FERM_M; FERM central domain
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