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    Cinp cyclin-dependent kinase 2 interacting protein [ Mus musculus (house mouse) ]

    Gene ID: 67236, updated on 31-Jan-2019

    Summary

    Official Symbol
    Cinpprovided by MGI
    Official Full Name
    cyclin-dependent kinase 2 interacting proteinprovided by MGI
    Primary source
    MGI:MGI:1914486
    See related
    Ensembl:ENSMUSG00000021276
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1810047K05Rik; 2810452K22Rik
    Expression
    Ubiquitous expression in liver E14 (RPKM 13.4), CNS E18 (RPKM 12.7) and 28 other tissues See more
    Orthologs

    Genomic context

    See Cinp in Genome Data Viewer
    Location:
    12; 12 F1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 12 NC_000078.6 (110872610..110889145, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 12 NC_000078.5 (112110832..112127324, complement)

    Chromosome 12 - NC_000078.6Genomic Context describing neighboring genes Neighboring gene nuclear encoded tRNA isoleucine 6 (anticodon AAT) Neighboring gene zinc finger protein 839 Neighboring gene mitochondrial pyruvate carrier 1, pseudogene Neighboring gene tectonin beta-propeller repeat containing 2 Neighboring gene ribosomal protein S19, pseudogene 6 Neighboring gene predicted gene, 40897

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    DNA repair IEA
    Inferred from Electronic Annotation
    more info
     
    DNA replication IEA
    Inferred from Electronic Annotation
    more info
     
    biological_process ND
    No biological Data available
    more info
     
    cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    cell division IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to DNA damage stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cyclin-dependent kinase 2-interacting protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026048.4NP_080324.1  cyclin-dependent kinase 2-interacting protein isoform 1

      See identical proteins and their annotated locations for NP_080324.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the predominant transcript. It encodes isoform 1.
      Source sequence(s)
      AC101875, AK076126, BB761424
      Consensus CDS
      CCDS36561.1
      UniProtKB/Swiss-Prot
      Q9D0V8
      Related
      ENSMUSP00000035245.8, ENSMUST00000043716.8
    2. NM_027223.1NP_081499.1  cyclin-dependent kinase 2-interacting protein isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) includes an alternate in-frame exon in the coding region, compared to variant 1. It encodes isoform 2, which is longer than isoform 1.
      Source sequence(s)
      AC101875
      UniProtKB/TrEMBL
      A0A1Y7VN75
      Related
      ENSMUSP00000152272.1, ENSMUST00000220607.1

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000078.6 Reference GRCm38.p4 C57BL/6J

      Range
      110872610..110889145 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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