Format

Send to:

Choose Destination
    • Showing Current items.

    Tmem19 transmembrane protein 19 [ Mus musculus (house mouse) ]

    Gene ID: 67226, updated on 23-Jun-2021

    Summary

    Official Symbol
    Tmem19provided by MGI
    Official Full Name
    transmembrane protein 19provided by MGI
    Primary source
    MGI:MGI:1914476
    See related
    Ensembl:ENSMUSG00000069520
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AW125171; 2810428F02Rik
    Expression
    Ubiquitous expression in kidney adult (RPKM 21.5), liver adult (RPKM 10.8) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Tmem19 in Genome Data Viewer
    Location:
    10; 10 D2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (115176644..115198406, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (115340739..115362522, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (114777795..114799318, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene RAB21, member RAS oncogene family Neighboring gene predicted gene, 53632 Neighboring gene soc-2 (suppressor of clear) homolog pseudogene Neighboring gene THAP domain containing, apoptosis associated protein 2 Neighboring gene predicted gene, 53633 Neighboring gene zinc finger, C3H1-type containing

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001359470.1NP_001346399.1  transmembrane protein 19 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC153497, AK034298, AK138931, BB636118
      Consensus CDS
      CCDS88087.1
      Related
      ENSMUSP00000151334.2, ENSMUST00000217887.2
      Conserved Domains (1) summary
      pfam01940
      Location:74337
      DUF92; Integral membrane protein DUF92
    2. NM_001359471.1NP_001346400.1  transmembrane protein 19 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC153497, AK018383, AK034298, AK138931
      Consensus CDS
      CCDS24178.1
      Conserved Domains (1) summary
      pfam01940
      Location:59322
      DUF92; Integral membrane protein DUF92
    3. NM_001359472.1NP_001346401.1  transmembrane protein 19 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC153497, AK034298, AK138931, CX200523
      Consensus CDS
      CCDS24178.1
      Related
      ENSMUSP00000151753.2, ENSMUST00000217884.2
      Conserved Domains (1) summary
      pfam01940
      Location:59322
      DUF92; Integral membrane protein DUF92
    4. NM_133683.4NP_598444.1  transmembrane protein 19 isoform 2

      See identical proteins and their annotated locations for NP_598444.1

      Status: VALIDATED

      Source sequence(s)
      AC153497, AK034298, AK138931
      Consensus CDS
      CCDS24178.1
      UniProtKB/Swiss-Prot
      Q91W52
      Related
      ENSMUSP00000089808.6, ENSMUST00000092170.7
      Conserved Domains (1) summary
      pfam01940
      Location:59322
      DUF92; Integral membrane protein DUF92

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      115176644..115198406 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006513978.3XP_006514041.1  transmembrane protein 19 isoform X2

      See identical proteins and their annotated locations for XP_006514041.1

      UniProtKB/TrEMBL
      A0A1W2P7R5
      Related
      ENSMUSP00000151762.2, ENSMUST00000218731.2
      Conserved Domains (1) summary
      pfam01940
      Location:1222
      DUF92; Integral membrane protein DUF92
    2. XM_006513977.2XP_006514040.1  transmembrane protein 19 isoform X2

      See identical proteins and their annotated locations for XP_006514040.1

      UniProtKB/TrEMBL
      A0A1W2P7R5
      Conserved Domains (1) summary
      pfam01940
      Location:1222
      DUF92; Integral membrane protein DUF92
    3. XM_036155960.1XP_036011853.1  transmembrane protein 19 isoform X1

      Conserved Domains (1) summary
      pfam01940
      Location:23263
      DUF92; Integral membrane protein DUF92
    Support Center