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    Armc10 armadillo repeat containing 10 [ Mus musculus (house mouse) ]

    Gene ID: 67211, updated on 23-Jun-2021

    Summary

    Official Symbol
    Armc10provided by MGI
    Official Full Name
    armadillo repeat containing 10provided by MGI
    Primary source
    MGI:MGI:1914461
    See related
    Ensembl:ENSMUSG00000038525
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Svh; 2810037C14Rik
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 37.9), ovary adult (RPKM 34.9) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Armc10 in Genome Data Viewer
    Location:
    5; 5 A3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (21851004..21867697)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (21646006..21662699)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (21151802..21168410)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene F-box and leucine-rich repeat protein 13 Neighboring gene predicted gene 6543 Neighboring gene protein archease pseudogene Neighboring gene N-acyl phosphatidylethanolamine phospholipase D Neighboring gene microRNA 12197 Neighboring gene BCL2-associated transcription factor 1 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables DNA binding domain binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables p53 binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion HDA PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    armadillo repeat-containing protein 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001363422.1NP_001350351.1  armadillo repeat-containing protein 10 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC161484
      Related
      ENSMUSP00000120269.2, ENSMUST00000148873.8
      Conserved Domains (2) summary
      sd00043
      Location:4773
      ARM; armadillo repeat [structural motif]
      pfam04826
      Location:43284
      Arm_2; Armadillo-like
    2. NM_026034.5NP_080310.1  armadillo repeat-containing protein 10 isoform 1

      See identical proteins and their annotated locations for NP_080310.1

      Status: VALIDATED

      Source sequence(s)
      AC161484
      Consensus CDS
      CCDS19104.1
      UniProtKB/Swiss-Prot
      Q9D0L7
      Related
      ENSMUSP00000072669.7, ENSMUST00000072896.13
      Conserved Domains (3) summary
      cd00020
      Location:53138
      ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
      pfam04826
      Location:50298
      Arm_2; Armadillo-like
      sd00043
      Location:5487
      ARM; armadillo repeat [structural motif]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      21851004..21867697
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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