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    Rnf141 ring finger protein 141 [ Mus musculus (house mouse) ]

    Gene ID: 67150, updated on 23-Jun-2021

    Summary

    Official Symbol
    Rnf141provided by MGI
    Official Full Name
    ring finger protein 141provided by MGI
    Primary source
    MGI:MGI:1914400
    See related
    Ensembl:ENSMUSG00000030788
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ZFP3; ZFP36; ZNF23; ZNF230; AA792898; AU022812; 2610110L04Rik
    Expression
    Ubiquitous expression in lung adult (RPKM 5.5), subcutaneous fat pad adult (RPKM 5.1) and 28 other tissues See more
    Orthologs
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    Try the new Transcript table

    Genomic context

    See Rnf141 in Genome Data Viewer
    Location:
    7; 7 E3
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (110398676..110443659, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (110799469..110844452, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (117960049..117987895, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA B430319F04 gene Neighboring gene adenosine monophosphate deaminase 3 Neighboring gene predicted gene, 39069 Neighboring gene lymphatic vessel endothelial hyaluronan receptor 1 Neighboring gene inositol 1,4,5-triphosphate receptor associated 1 Neighboring gene predicted gene 16336

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ubiquitin-protein transferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables ubiquitin-protein transferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in protein autoubiquitination IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in protein autoubiquitination ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within regulation of transcription, DNA-templated IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    RING finger protein 141
    Names
    zinc finger protein 230

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025999.3NP_080275.2  RING finger protein 141

      See identical proteins and their annotated locations for NP_080275.2

      Status: PROVISIONAL

      Source sequence(s)
      AK015505
      Consensus CDS
      CCDS40086.1
      UniProtKB/Swiss-Prot
      Q99MB7
      Related
      ENSMUSP00000134781.2, ENSMUST00000177236.8
      Conserved Domains (1) summary
      cd16545
      Location:154192
      RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      110398676..110443659 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030242921.1XP_030098781.1  RING finger protein 141 isoform X2

      Conserved Domains (1) summary
      cl17238
      Location:154180
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    2. XM_006508125.2XP_006508188.1  RING finger protein 141 isoform X3

      See identical proteins and their annotated locations for XP_006508188.1

      UniProtKB/TrEMBL
      H3BJB4
      Related
      ENSMUSP00000134917.2, ENSMUST00000177462.8
      Conserved Domains (1) summary
      cl17238
      Location:154180
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    3. XM_006508123.4XP_006508186.1  RING finger protein 141 isoform X1

      See identical proteins and their annotated locations for XP_006508186.1

      UniProtKB/Swiss-Prot
      Q99MB7
      Related
      ENSMUSP00000102293.4, ENSMUST00000106682.10
      Conserved Domains (1) summary
      cd16545
      Location:154192
      RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins
    4. XM_006508124.4XP_006508187.1  RING finger protein 141 isoform X1

      See identical proteins and their annotated locations for XP_006508187.1

      UniProtKB/Swiss-Prot
      Q99MB7
      Conserved Domains (1) summary
      cd16545
      Location:154192
      RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins
    5. XM_036153378.1XP_036009271.1  RING finger protein 141 isoform X3

      Conserved Domains (1) summary
      cl17238
      Location:154180
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    RNA

    1. XR_869742.1 RNA Sequence

    2. XR_003946542.1 RNA Sequence

    3. XR_001777995.1 RNA Sequence

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