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    Ramac RNA guanine-7 methyltransferase activating subunit [ Mus musculus (house mouse) ]

    Gene ID: 67148, updated on 31-Jan-2019

    Summary

    Official Symbol
    Ramacprovided by MGI
    Official Full Name
    RNA guanine-7 methyltransferase activating subunitprovided by MGI
    Primary source
    MGI:MGI:1914398
    See related
    Ensembl:ENSMUSG00000038646
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    RAM; Rammet; Fam103a1; 2410047I02Rik; 2610204K14Rik
    Expression
    Ubiquitous expression in bladder adult (RPKM 29.5), CNS E18 (RPKM 25.4) and 24 other tissues See more
    Orthologs

    Genomic context

    See Ramac in Genome Data Viewer
    Location:
    7; 7 D3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (81762953..81769490)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (88907839..88914376)

    Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 42400 Neighboring gene G2/M-phase specific E3 ubiquitin ligase pseudogene Neighboring gene RIKEN cDNA 3110040N11 gene Neighboring gene BTB (POZ) domain containing 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    RNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    contributes_to mRNA (guanine-N7-)-methyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    7-methylguanosine mRNA capping ISO
    Inferred from Sequence Orthology
    more info
     
    RNA 5'-cap (guanine-N7)-methylation IEA
    Inferred from Electronic Annotation
    more info
     
    mRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    methylation ISO
    Inferred from Sequence Orthology
    more info
     
    recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    mRNA cap binding complex ISO
    Inferred from Sequence Orthology
    more info
     
    mRNA cap methyltransferase complex ISO
    Inferred from Sequence Orthology
    more info
     
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    RNA guanine-N7 methyltransferase activating subunit
    Names
    RNMT actvating mRNA cap methylating subunit
    RNMT-activating mRNA cap methylating subunit
    RNMT-activating mRNA cap methyltransferase subunit
    RNMT-activating mini protein
    family with sequence similarity 103, member A1
    protein FAM103A1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025997.2NP_080273.1  RNA guanine-N7 methyltransferase activating subunit

      See identical proteins and their annotated locations for NP_080273.1

      Status: PROVISIONAL

      Source sequence(s)
      AC102077, AC130538
      Consensus CDS
      CCDS21406.1
      UniProtKB/Swiss-Prot
      Q9CQY2
      Related
      ENSMUSP00000039065.4, ENSMUST00000042166.10
      Conserved Domains (1) summary
      pfam15320
      Location:1087
      RAM; mRNA cap methylation, RNMT-activating mini protein

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

      Range
      81762953..81769490
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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