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    Chmp1b charged multivesicular body protein 1B [ Mus musculus (house mouse) ]

    Gene ID: 67064, updated on 31-Jan-2019

    Summary

    Official Symbol
    Chmp1bprovided by MGI
    Official Full Name
    charged multivesicular body protein 1Bprovided by MGI
    Primary source
    MGI:MGI:1914314
    See related
    Ensembl:ENSMUSG00000109901
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Chmp1b1; 2810405I11Rik
    Orthologs

    Genomic context

    See Chmp1b in Genome Data Viewer
    Location:
    18; 18 E1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 18 NC_000084.6 (67205359..67207887)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (67365013..67367541)

    Chromosome 18 - NC_000084.6Genomic Context describing neighboring genes Neighboring gene melanocortin 4 receptor Neighboring gene predicted gene, 19784 Neighboring gene guanine nucleotide binding protein, alpha stimulating, olfactory type Neighboring gene metallophosphoesterase 1 Neighboring gene predicted gene, 30321 Neighboring gene inositol (myo)-1(or 4)-monophosphatase 2

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    • ESCRT-III complex, organism-specific biosystem (from KEGG)
      ESCRT-III complex, organism-specific biosystemStructural complex; Genetic information processing; Protein processing
    • ESCRT-III complex, conserved biosystem (from KEGG)
      ESCRT-III complex, conserved biosystemStructural complex; Genetic information processing; Protein processing
    • Endocytosis, organism-specific biosystem (from KEGG)
      Endocytosis, organism-specific biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...
    • Endocytosis, conserved biosystem (from KEGG)
      Endocytosis, conserved biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    protein domain specific binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    cell division ISO
    Inferred from Sequence Orthology
    more info
     
    endosome transport via multivesicular body sorting pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    establishment of protein localization ISO
    Inferred from Sequence Orthology
    more info
     
    late endosome to vacuole transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    midbody abscission ISO
    Inferred from Sequence Orthology
    more info
     
    mitotic metaphase plate congression ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus organization ISO
    Inferred from Sequence Orthology
    more info
     
    protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    regulation of centrosome duplication ISO
    Inferred from Sequence Orthology
    more info
     
    regulation of mitotic spindle assembly ISO
    Inferred from Sequence Orthology
    more info
     
    vacuolar transport IEA
    Inferred from Electronic Annotation
    more info
     
    viral budding via host ESCRT complex ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    ESCRT III complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    ESCRT III complex ISO
    Inferred from Sequence Orthology
    more info
     
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    endosome IEA
    Inferred from Electronic Annotation
    more info
     
    endosome membrane ISO
    Inferred from Sequence Orthology
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane coat ISO
    Inferred from Sequence Orthology
    more info
     
    midbody ISO
    Inferred from Sequence Orthology
    more info
     
    multivesicular body IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    charged multivesicular body protein 1b-1
    Names
    chromatin modifying protein 1B
    chromatin-modifying protein 1b-1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_024190.2NP_077152.1  charged multivesicular body protein 1b-1

      See identical proteins and their annotated locations for NP_077152.1

      Status: VALIDATED

      Source sequence(s)
      AC140336
      Consensus CDS
      CCDS84391.1
      UniProtKB/Swiss-Prot
      Q99LU0
      Related
      ENSMUSP00000147285.1, ENSMUST00000210564.1
      Conserved Domains (1) summary
      cl21588
      Location:49189
      Snf7; Snf7

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000084.6 Reference GRCm38.p4 C57BL/6J

      Range
      67205359..67207887
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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