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    Ccdc91 coiled-coil domain containing 91 [ Mus musculus (house mouse) ]

    Gene ID: 67015, updated on 5-Mar-2019

    Summary

    Official Symbol
    Ccdc91provided by MGI
    Official Full Name
    coiled-coil domain containing 91provided by MGI
    Primary source
    MGI:MGI:1914265
    See related
    Ensembl:ENSMUSG00000030301
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    p56; AU045683; AW555238; 1700086G08Rik; 1810060J02Rik
    Expression
    Biased expression in testis adult (RPKM 109.4), adrenal adult (RPKM 9.3) and 11 other tissues See more
    Orthologs

    Genomic context

    See Ccdc91 in Genome Data Viewer
    Location:
    6; 6 G3
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 6 NC_000072.6 (147475871..147632613)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (147424393..147581134)

    Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene ribosomal protein L5 pseudogene Neighboring gene predicted gene 6288 Neighboring gene RIKEN cDNA 1700049E15 gene Neighboring gene predicted gene 15762

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    Golgi to lysosome transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Golgi to lysosome transport ISO
    Inferred from Sequence Orthology
    more info
     
    Golgi vesicle transport IEA
    Inferred from Electronic Annotation
    more info
     
    protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    cell ISO
    Inferred from Sequence Orthology
    more info
     
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    trans-Golgi network IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    trans-Golgi network ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    coiled-coil domain-containing protein 91
    Names
    GGA-binding partner

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001355713.1NP_001342642.1  coiled-coil domain-containing protein 91 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC132614, AC152952, BC049073
      Conserved Domains (1) summary
      cl25732
      Location:133368
      SMC_N; RecF/RecN/SMC N terminal domain
    2. NM_001355714.1NP_001342643.1  coiled-coil domain-containing protein 91 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC132614, AC152952, BC049073
    3. NM_001355715.1NP_001342644.1  coiled-coil domain-containing protein 91 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC132614, AC152952, BC049073
    4. NM_025911.2NP_080187.2  coiled-coil domain-containing protein 91 isoform 1

      See identical proteins and their annotated locations for NP_080187.2

      Status: VALIDATED

      Source sequence(s)
      AK007017, AK007917, CO038888
      Consensus CDS
      CCDS20707.1
      UniProtKB/Swiss-Prot
      Q9D8L5
      Related
      ENSMUSP00000032441.6, ENSMUST00000032441.13
      Conserved Domains (1) summary
      cl25732
      Location:133368
      SMC_N; RecF/RecN/SMC N terminal domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000072.6 Reference GRCm38.p4 C57BL/6J

      Range
      147475871..147632613
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006507077.3XP_006507140.1  coiled-coil domain-containing protein 91 isoform X2

      Conserved Domains (1) summary
      pfam07851
      Location:149259
      TMPIT; TMPIT-like protein
    2. XM_006507076.1XP_006507139.1  coiled-coil domain-containing protein 91 isoform X1

      See identical proteins and their annotated locations for XP_006507139.1

      UniProtKB/Swiss-Prot
      Q9D8L5
      Conserved Domains (1) summary
      cl25732
      Location:133368
      SMC_N; RecF/RecN/SMC N terminal domain
    3. XM_017321715.1XP_017177204.1  coiled-coil domain-containing protein 91 isoform X2

      Conserved Domains (1) summary
      pfam07851
      Location:149259
      TMPIT; TMPIT-like protein
    4. XM_017321714.1XP_017177203.1  coiled-coil domain-containing protein 91 isoform X1

      UniProtKB/Swiss-Prot
      Q9D8L5
      Conserved Domains (1) summary
      cl25732
      Location:133368
      SMC_N; RecF/RecN/SMC N terminal domain
    5. XM_006507078.3XP_006507141.1  coiled-coil domain-containing protein 91 isoform X2

      See identical proteins and their annotated locations for XP_006507141.1

      Conserved Domains (1) summary
      pfam07851
      Location:149259
      TMPIT; TMPIT-like protein
    6. XM_006507080.2XP_006507143.1  coiled-coil domain-containing protein 91 isoform X2

      See identical proteins and their annotated locations for XP_006507143.1

      Conserved Domains (1) summary
      pfam07851
      Location:149259
      TMPIT; TMPIT-like protein
    7. XM_006507079.3XP_006507142.1  coiled-coil domain-containing protein 91 isoform X2

      See identical proteins and their annotated locations for XP_006507142.1

      Conserved Domains (1) summary
      pfam07851
      Location:149259
      TMPIT; TMPIT-like protein

    Reference GRCm38.p4 NOD/ShiLtJ

    Genomic

    1. NT_166305.2 Reference GRCm38.p4 NOD/ShiLtJ

      Range
      4006665..4162643
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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