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    Mfsd14b major facilitator superfamily domain containing 14B [ Mus musculus (house mouse) ]

    Gene ID: 66631, updated on 31-Jan-2019

    Summary

    Official Symbol
    Mfsd14bprovided by MGI
    Official Full Name
    major facilitator superfamily domain containing 14Bprovided by MGI
    Primary source
    MGI:MGI:1913881
    See related
    Ensembl:ENSMUSG00000038212
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hiatl1; AU045608; AW539692; 5730414C17Rik
    Expression
    Ubiquitous expression in adrenal adult (RPKM 14.5), placenta adult (RPKM 12.6) and 28 other tissues See more
    Orthologs

    Genomic context

    See Mfsd14b in Genome Data Viewer
    Location:
    13; 13 B3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 13 NC_000079.6 (65065030..65113002, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (65166338..65214290, complement)

    Chromosome 13 - NC_000079.6Genomic Context describing neighboring genes Neighboring gene spermatogenesis associated 31 subfamily D, member 1C Neighboring gene protease, serine 47 Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 pseudogene Neighboring gene olfactory receptor 465, pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    hippocampus abundant transcript-like protein 1
    Names
    hippocampus abundant transcript-like 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001083901.1NP_001077370.1  hippocampus abundant transcript-like protein 1

      See identical proteins and their annotated locations for NP_001077370.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1.
      Source sequence(s)
      AK146596, BG063674, BY152935, CN709077
      Consensus CDS
      CCDS26603.2
      UniProtKB/Swiss-Prot
      Q8CIA9
      Related
      ENSMUSP00000062566.8, ENSMUST00000054730.9
      Conserved Domains (2) summary
      cd06174
      Location:50452
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:51396
      MFS_1; Major Facilitator Superfamily
    2. NM_133680.3NP_598441.3  hippocampus abundant transcript-like protein 1

      See identical proteins and their annotated locations for NP_598441.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript.
      Source sequence(s)
      AK146596, BG063674, BY152935, BY740089, CN709077
      Consensus CDS
      CCDS26603.2
      UniProtKB/Swiss-Prot
      Q8CIA9
      Related
      ENSMUSP00000118180.1, ENSMUST00000155487.7
      Conserved Domains (2) summary
      cd06174
      Location:50452
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:51396
      MFS_1; Major Facilitator Superfamily

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000079.6 Reference GRCm38.p4 C57BL/6J

      Range
      65065030..65113002 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011244550.2XP_011242852.1  hippocampus abundant transcript-like protein 1 isoform X1

      See identical proteins and their annotated locations for XP_011242852.1

      UniProtKB/Swiss-Prot
      Q8CIA9
      Conserved Domains (2) summary
      cd06174
      Location:50452
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:51396
      MFS_1; Major Facilitator Superfamily
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