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    Mfsd14b major facilitator superfamily domain containing 14B [ Mus musculus (house mouse) ]

    Gene ID: 66631, updated on 26-Sep-2022

    Summary

    Official Symbol
    Mfsd14bprovided by MGI
    Official Full Name
    major facilitator superfamily domain containing 14Bprovided by MGI
    Primary source
    MGI:MGI:1913881
    See related
    Ensembl:ENSMUSG00000038212 AllianceGenome:MGI:1913881
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hiatl1; 5730414C17Rik
    Summary
    Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human MFSD14B (major facilitator superfamily domain containing 14B). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in adrenal adult (RPKM 14.5), placenta adult (RPKM 12.6) and 28 other tissues See more
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    Genomic context

    See Mfsd14b in Genome Data Viewer
    Location:
    13; 13 B3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (65212844..65260813, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (65065030..65112999, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene spermatogenesis associated 31 subfamily D, member 1C Neighboring gene protease, serine 47 Neighboring gene predicted gene 3785 Neighboring gene olfactory receptor family 14 subfamily P member 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    hippocampus abundant transcript-like protein 1
    Names
    hippocampus abundant transcript-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001083901.1NP_001077370.1  hippocampus abundant transcript-like protein 1

      See identical proteins and their annotated locations for NP_001077370.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1.
      Source sequence(s)
      AK146596, BG063674, BY152935, CN709077
      Consensus CDS
      CCDS26603.2
      UniProtKB/Swiss-Prot
      Q8CIA9, Q8VCW0
      Related
      ENSMUSP00000062566.9, ENSMUST00000054730.10
      Conserved Domains (1) summary
      cd17387
      Location:47452
      MFS_MFSD14; Major facilitator superfamily domain-containing 14A and 14B
    2. NM_133680.3NP_598441.3  hippocampus abundant transcript-like protein 1

      See identical proteins and their annotated locations for NP_598441.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript.
      Source sequence(s)
      AK146596, BG063674, BY152935, BY740089, CN709077
      Consensus CDS
      CCDS26603.2
      UniProtKB/Swiss-Prot
      Q8CIA9, Q8VCW0
      Related
      ENSMUSP00000118180.2, ENSMUST00000155487.8
      Conserved Domains (1) summary
      cd17387
      Location:47452
      MFS_MFSD14; Major facilitator superfamily domain-containing 14A and 14B

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      65212844..65260813 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011244550.4XP_011242852.1  hippocampus abundant transcript-like protein 1 isoform X1

      See identical proteins and their annotated locations for XP_011242852.1

      UniProtKB/Swiss-Prot
      Q8CIA9, Q8VCW0
      Conserved Domains (1) summary
      cd17387
      Location:47452
      MFS_MFSD14; Major facilitator superfamily domain-containing 14A and 14B