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    Golph3 golgi phosphoprotein 3 [ Mus musculus (house mouse) ]

    Gene ID: 66629, updated on 23-Jun-2021

    Summary

    Official Symbol
    Golph3provided by MGI
    Official Full Name
    golgi phosphoprotein 3provided by MGI
    Primary source
    MGI:MGI:1913879
    See related
    Ensembl:ENSMUSG00000022200
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AW413496; 4733401N08Rik; 5730410D03Rik
    Expression
    Ubiquitous expression in adrenal adult (RPKM 44.1), ovary adult (RPKM 42.3) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Golph3 in Genome Data Viewer
    Location:
    15; 15 A1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (12319617..12351687)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (12320488..12351601)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (12251251..12281022)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene myotubularin related protein 12 Neighboring gene predicted gene, 46497 Neighboring gene predicted gene, 52210 Neighboring gene PDZ domain containing 2 Neighboring gene predicted gene, 52211 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables enzyme binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables phosphatidylinositol-4-phosphate binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables phosphatidylinositol-4-phosphate binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in Golgi organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in Golgi organization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in Golgi ribbon formation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in Golgi to plasma membrane protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in Golgi to plasma membrane protein transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in Golgi vesicle budding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in Golgi vesicle budding ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in asymmetric Golgi ribbon formation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cell adhesion molecule production ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cell migration ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to rapamycin ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in gene expression ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in glycoprotein biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in lamellipodium assembly ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in leukocyte tethering or rolling ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of TOR signaling ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of protein secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein retention in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein secretion ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of mitochondrion organization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in Golgi cisterna IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in Golgi cisterna ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in trans-Golgi network IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in trans-Golgi network ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    Golgi phosphoprotein 3
    Names
    coat protein GPP34

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025673.2NP_079949.1  Golgi phosphoprotein 3

      See identical proteins and their annotated locations for NP_079949.1

      Status: PROVISIONAL

      Source sequence(s)
      BC051035
      Consensus CDS
      CCDS27389.1
      UniProtKB/Swiss-Prot
      Q9CRA5
      Related
      ENSMUSP00000057375.6, ENSMUST00000059680.7
      Conserved Domains (1) summary
      pfam05719
      Location:62271
      GPP34; Golgi phosphoprotein 3 (GPP34)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      12319617..12351687
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006520143.3XP_006520206.1  Golgi phosphoprotein 3 isoform X1

      Conserved Domains (1) summary
      pfam05719
      Location:60227
      GPP34; Golgi phosphoprotein 3 (GPP34)
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