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    Pphln1-ps1 periphilin 1, pseudogene 1 [ Mus musculus (house mouse) ]

    Gene ID: 66598, updated on 23-Jun-2022

    Summary

    Official Symbol
    Pphln1-ps1provided by MGI
    Official Full Name
    periphilin 1, pseudogene 1provided by MGI
    Primary source
    MGI:MGI:1913848
    See related
    AllianceGenome:MGI:1913848
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    3110001I22Rik
    Summary
    Predicted to be involved in negative regulation of gene expression, epigenetic and protein localization to heterochromatin. Predicted to be active in nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]
    Annotation information
    not in current annotation release
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 2.7), CNS E14 (RPKM 2.5) and 28 other tissues See more
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    Genomic context

    See Pphln1-ps1 in Genome Data Viewer
    Location:
    16; 16 A1
    Annotation release Status Assembly Chr Location
    Build 37.2 latest, but not current MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (13672113..13678478)
    Build 37.2 latest, but not current Mm_Celera (GCF_000002165.2) 16 AC_000038.1 (14277006..14283371)

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Other Names

    • periphilin-1 pseudogene

    Clone Names

    • MGC48147

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in negative regulation of gene expression, epigenetic IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in protein localization to heterochromatin IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in nucleoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_175936.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC154607