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    2810004N23Rik RIKEN cDNA 2810004N23 gene [ Mus musculus (house mouse) ]

    Gene ID: 66523, updated on 23-Jun-2021

    Summary

    Official Symbol
    2810004N23Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 2810004N23 geneprovided by MGI
    Primary source
    MGI:MGI:1913773
    See related
    Ensembl:ENSMUSG00000031984
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ayu21-5; Ayu21-55; GtAyu21-5; GtAyu21-55; 3110004G14Rik; Gt(pU21)55Imeg
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 13.6), liver E14 (RPKM 11.8) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See 2810004N23Rik in Genome Data Viewer
    Location:
    8; 8 E2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (125566094..125589768, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (124839355..124863029, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (127363255..127386929, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene general transcription factor IIB pseudogene Neighboring gene predicted gene, 46059 Neighboring gene tripartite motif-containing 67 Neighboring gene glyceronephosphate O-acyltransferase Neighboring gene exocyst complex component 8

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in chromosome ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein C1orf131 homolog
    Names
    Ayu21-55Imeg
    Gt(Ayu21)55Imeg

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025615.2NP_079891.2  uncharacterized protein C1orf131 homolog

      See identical proteins and their annotated locations for NP_079891.2

      Status: VALIDATED

      Source sequence(s)
      AK011944, AK143919, BY030694
      Consensus CDS
      CCDS22775.1
      UniProtKB/Swiss-Prot
      Q8CIL4
      UniProtKB/TrEMBL
      Q9CSU7
      Related
      ENSMUSP00000034465.8, ENSMUST00000034465.9
      Conserved Domains (1) summary
      pfam15375
      Location:132239
      DUF4602; Domain of unknown function (DUF4602)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      125566094..125589768 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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