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    Anp32e acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [ Mus musculus (house mouse) ]

    Gene ID: 66471, updated on 31-Jan-2019

    Summary

    Official Symbol
    Anp32eprovided by MGI
    Official Full Name
    acidic (leucine-rich) nuclear phosphoprotein 32 family, member Eprovided by MGI
    Primary source
    MGI:MGI:1913721
    See related
    Ensembl:ENSMUSG00000015749
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CPD1; LANPL; LANP-L; mLANP-L; AI047746; AI326868; 2810018A15Rik
    Expression
    Biased expression in CNS E11.5 (RPKM 136.9), liver E14 (RPKM 55.6) and 14 other tissues See more
    Orthologs

    Genomic context

    See Anp32e in Genome Data Viewer
    Location:
    3; 3 F2.1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 3 NC_000069.6 (95929245..95947387)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (95733180..95751310)

    Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene aph1 homolog A, gamma secretase subunit Neighboring gene carbonic anhydrase 14 Neighboring gene predicted gene, 46815 Neighboring gene ferritin light chain 2 pseudogene Neighboring gene predicted gene 9054

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC11640

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    histone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    phosphatase inhibitor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    phosphatase inhibitor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    chromatin organization IEA
    Inferred from Electronic Annotation
    more info
     
    histone exchange IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytoplasmic vesicle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    acidic leucine-rich nuclear phosphoprotein 32 family member E
    Names
    LANP-like protein
    cerebellar postnatal development protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001253757.1NP_001240686.1  acidic leucine-rich nuclear phosphoprotein 32 family member E isoform 2

      See identical proteins and their annotated locations for NP_001240686.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate in-frame splice junction at the 3' end of an exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
      Source sequence(s)
      AC092855, AI613710, AK147888, AK159446, BY270013, CF952181
      Consensus CDS
      CCDS57238.1
      UniProtKB/Swiss-Prot
      P97822
      UniProtKB/TrEMBL
      Q3TX26
      Related
      ENSMUSP00000015893.6, ENSMUST00000015893.12
      Conserved Domains (4) summary
      cd00116
      Location:16146
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:4465
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:88130
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:65125
      LRR_8; Leucine rich repeat
    2. NM_001253758.1NP_001240687.1  acidic leucine-rich nuclear phosphoprotein 32 family member E isoform 3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) lacks an alternate in-frame segment compared to variant 1. The resulting isoform (3) has the same N- and C-termini but is shorter compared to isoform 1.
      Source sequence(s)
      AC092855, AI613710
      Consensus CDS
      CCDS57239.1
      UniProtKB/TrEMBL
      E9Q5H9
      Related
      ENSMUSP00000130599.1, ENSMUST00000171368.7
    3. NM_023210.4NP_075699.3  acidic leucine-rich nuclear phosphoprotein 32 family member E isoform 1

      See identical proteins and their annotated locations for NP_075699.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
      Source sequence(s)
      AI613710, AK049647, AK159446, BY254191
      Consensus CDS
      CCDS17626.1
      UniProtKB/Swiss-Prot
      P97822
      UniProtKB/TrEMBL
      Q3TX26
      Related
      ENSMUSP00000128483.1, ENSMUST00000165307.7
      Conserved Domains (4) summary
      cd00116
      Location:16146
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:4465
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:88130
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:65125
      LRR_8; Leucine rich repeat

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000069.6 Reference GRCm38.p4 C57BL/6J

      Range
      95929245..95947387
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011240193.2XP_011238495.1  acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X1

      Conserved Domains (2) summary
      sd00033
      Location:4465
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:65107
      LRR_4; Leucine Rich repeats (2 copies)
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