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    Slc7a6os solute carrier family 7, member 6 opposite strand [ Mus musculus (house mouse) ]

    Gene ID: 66432, updated on 9-Sep-2018

    Summary

    Official Symbol
    Slc7a6osprovided by MGI
    Official Full Name
    solute carrier family 7, member 6 opposite strandprovided by MGI
    Primary source
    MGI:MGI:1916951
    See related
    Ensembl:ENSMUSG00000033106 Vega:OTTMUSG00000061945
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2010007L18Rik; 2400002F02Rik
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 15.5), limb E14.5 (RPKM 13.6) and 28 other tissues See more
    Orthologs

    Genomic context

    See Slc7a6os in Genome Data Viewer
    Location:
    8; 8 D3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 8 NC_000074.6 (106200438..106210992, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (108724338..108734833, complement)

    Chromosome 8 - NC_000074.6Genomic Context describing neighboring genes Neighboring gene phospholipase A2, group XV Neighboring gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 Neighboring gene protein arginine N-methyltransferase 7 Neighboring gene sphingomyelin phosphodiesterase 3, neutral Neighboring gene RIKEN cDNA 4930506A18 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Clone Names

    • MGC60796

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    developmental process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    hematopoietic progenitor cell differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    probable RNA polymerase II nuclear localization protein SLC7A6OS
    Names
    protein SLC7A6OS
    solute carrier family 7 member 6 opposite strand transcript homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001007567.2NP_001007568.1  probable RNA polymerase II nuclear localization protein SLC7A6OS

      See identical proteins and their annotated locations for NP_001007568.1

      Status: VALIDATED

      Source sequence(s)
      AC133195, AK146733
      Consensus CDS
      CCDS22632.1
      UniProtKB/Swiss-Prot
      Q7TPE5
      Related
      ENSMUSP00000039029.5, OTTMUSP00000078408, ENSMUST00000035925.6, OTTMUST00000151195
      Conserved Domains (1) summary
      pfam08574
      Location:191255
      DUF1762; Protein of unknown function (DUF1762)

    RNA

    1. NR_152744.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC133195

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000074.6 Reference GRCm38.p4 C57BL/6J

      Range
      106200438..106210992 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_878866.1 RNA Sequence

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