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    Mterf3 mitochondrial transcription termination factor 3 [ Mus musculus (house mouse) ]

    Gene ID: 66410, updated on 23-Jun-2021

    Summary

    Official Symbol
    Mterf3provided by MGI
    Official Full Name
    mitochondrial transcription termination factor 3provided by MGI
    Primary source
    MGI:MGI:1913660
    See related
    Ensembl:ENSMUSG00000021519
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mterfd; Mterfd1; 2410017I18Rik
    Expression
    Ubiquitous expression in CNS E18 (RPKM 7.6), whole brain E14.5 (RPKM 7.6) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Mterf3 in Genome Data Viewer
    Location:
    13; 13 B3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (67053520..67081148, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (66906577..66933083, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (67013031..67034008, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene high mobility group box 2 pseudogene Neighboring gene ubiquinol-cytochrome c reductase binding protein Neighboring gene predicted gene 10767 Neighboring gene phosphatidylserine synthase 1 Neighboring gene RIKEN cDNA 4933433G19 gene Neighboring gene zinc finger protein 712

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables double-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables transcription cis-regulatory region binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrion HDA PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    transcription termination factor 3, mitochondrial
    Names
    MTERF domain containing 1
    mTERF domain-containing protein 1, mitochondrial

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025547.4NP_079823.2  transcription termination factor 3, mitochondrial precursor

      See identical proteins and their annotated locations for NP_079823.2

      Status: VALIDATED

      Source sequence(s)
      AC124433
      Consensus CDS
      CCDS26611.1
      UniProtKB/Swiss-Prot
      Q8R3J4
      Related
      ENSMUSP00000021991.5, ENSMUST00000021991.11
      Conserved Domains (1) summary
      cl19765
      Location:148350
      mTERF

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      67053520..67081148 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006517322.4XP_006517385.1  transcription termination factor 3, mitochondrial isoform X3

      Conserved Domains (1) summary
      cl19765
      Location:148348
      mTERF
    2. XM_036158110.1XP_036014003.1  transcription termination factor 3, mitochondrial isoform X1

      Conserved Domains (1) summary
      cl19765
      Location:148363
      mTERF
    3. XM_011244548.4XP_011242850.1  transcription termination factor 3, mitochondrial isoform X2

      See identical proteins and their annotated locations for XP_011242850.1

      UniProtKB/Swiss-Prot
      Q8R3J4
      Conserved Domains (1) summary
      cl19765
      Location:148350
      mTERF
    4. XM_017315563.3XP_017171052.1  transcription termination factor 3, mitochondrial isoform X2

      UniProtKB/Swiss-Prot
      Q8R3J4
      Conserved Domains (1) summary
      cl19765
      Location:148350
      mTERF
    5. XM_006517321.3XP_006517384.1  transcription termination factor 3, mitochondrial isoform X2

      See identical proteins and their annotated locations for XP_006517384.1

      UniProtKB/Swiss-Prot
      Q8R3J4
      Conserved Domains (1) summary
      cl19765
      Location:148350
      mTERF
    6. XM_036158114.1XP_036014007.1  transcription termination factor 3, mitochondrial isoform X1

      Conserved Domains (1) summary
      cl19765
      Location:148363
      mTERF
    7. XM_036158111.1XP_036014004.1  transcription termination factor 3, mitochondrial isoform X1

      Conserved Domains (1) summary
      cl19765
      Location:148363
      mTERF
    8. XM_030247357.2XP_030103217.1  transcription termination factor 3, mitochondrial isoform X2

      Conserved Domains (1) summary
      cl19765
      Location:148350
      mTERF
    9. XM_036158113.1XP_036014006.1  transcription termination factor 3, mitochondrial isoform X1

      Conserved Domains (1) summary
      cl19765
      Location:148363
      mTERF
    10. XM_036158112.1XP_036014005.1  transcription termination factor 3, mitochondrial isoform X1

      Conserved Domains (1) summary
      cl19765
      Location:148363
      mTERF

    RNA

    1. XR_004938051.1 RNA Sequence

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