Format

Send to:

Choose Destination
    • Showing Current items.

    2310011J03Rik RIKEN cDNA 2310011J03 gene [ Mus musculus (house mouse) ]

    Gene ID: 66374, updated on 31-Jan-2019

    Summary

    Official Symbol
    2310011J03Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 2310011J03 geneprovided by MGI
    Primary source
    MGI:MGI:1913624
    See related
    Ensembl:ENSMUSG00000020133
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI452186; AW545358
    Expression
    Ubiquitous expression in cerebellum adult (RPKM 87.6), CNS E11.5 (RPKM 72.8) and 28 other tissues See more
    Orthologs

    Genomic context

    See 2310011J03Rik in Genome Data Viewer
    Location:
    10; 10 C1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 10 NC_000076.6 (80318255..80320548, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (79781000..79783293, complement)

    Chromosome 10 - NC_000076.6Genomic Context describing neighboring genes Neighboring gene ribosomal protein S15 Neighboring gene predicted gene, 30682 Neighboring gene adenomatosis polyposis coli 2 Neighboring gene proprotein convertase subtilisin/kexin type 4 Neighboring gene receptor accessory protein 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    UPF0449 protein C19orf25 homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025521.3NP_079797.1  UPF0449 protein C19orf25 homolog

      See identical proteins and their annotated locations for NP_079797.1

      Status: VALIDATED

      Source sequence(s)
      AK009305, BY596174, CJ185647
      Consensus CDS
      CCDS24017.1
      UniProtKB/Swiss-Prot
      Q9D7E4
      Related
      ENSMUSP00000020341.8, ENSMUST00000020341.8
      Conserved Domains (1) summary
      pfam15136
      Location:6103
      UPF0449; uncharacterized protein family UPF0449

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000076.6 Reference GRCm38.p4 C57BL/6J

      Range
      80318255..80320548 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center