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    Ostc oligosaccharyltransferase complex subunit (non-catalytic) [ Mus musculus (house mouse) ]

    Gene ID: 66357, updated on 27-Nov-2024

    Summary

    Official Symbol
    Ostcprovided by MGI
    Official Full Name
    oligosaccharyltransferase complex subunit (non-catalytic)provided by MGI
    Primary source
    MGI:MGI:1913607
    See related
    Ensembl:ENSMUSG00000041084 AllianceGenome:MGI:1913607
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2310008M10Rik; 5730557H03Rik
    Summary
    Predicted to be part of oligosaccharyltransferase complex. Is expressed in several structures, including Meckel's cartilage; central nervous system; pancreas epithelium; retina; and skeleton. Orthologous to human OSTC (oligosaccharyltransferase complex non-catalytic subunit). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in placenta adult (RPKM 137.0), liver E18 (RPKM 84.4) and 27 other tissues See more
    Orthologs
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    Genomic context

    See Ostc in Genome Data Viewer
    Location:
    3 G3; 3 60.53 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (130489566..130503093, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (130695917..130709444, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene ethanolamine phosphate phospholyase Neighboring gene predicted gene, 36322 Neighboring gene predicted gene, 36373 Neighboring gene STARR-positive B cell enhancer ABC_E4590 Neighboring gene STARR-positive B cell enhancer ABC_E4591 Neighboring gene STARR-positive B cell enhancer ABC_E828 Neighboring gene STARR-positive B cell enhancer ABC_E1266 Neighboring gene STARR-seq mESC enhancer starr_08989 Neighboring gene ribosomal protein L34 Neighboring gene predicted gene 43522

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    oligosaccharyltransferase complex subunit OSTC

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025509.3NP_079785.1  oligosaccharyltransferase complex subunit OSTC

      See identical proteins and their annotated locations for NP_079785.1

      Status: VALIDATED

      Source sequence(s)
      AK011085, BP770975, BY228396
      Consensus CDS
      CCDS38639.1
      UniProtKB/Swiss-Prot
      Q78XF5, Q9CPZ2
      Related
      ENSMUSP00000046480.8, ENSMUST00000043937.9
      Conserved Domains (1) summary
      pfam04756
      Location:17146
      OST3_OST6; OST3 / OST6 family, transporter family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      130489566..130503093 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)