Format

Send to:

Choose Destination
    • Showing Current items.

    Atp6v1g1 ATPase, H+ transporting, lysosomal V1 subunit G1 [ Mus musculus (house mouse) ]

    Gene ID: 66290, updated on 8-Jul-2021

    Summary

    Official Symbol
    Atp6v1g1provided by MGI
    Official Full Name
    ATPase, H+ transporting, lysosomal V1 subunit G1provided by MGI
    Primary source
    MGI:MGI:1913540
    See related
    Ensembl:ENSMUSG00000039105
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    VA; ATP; Vma; Atp6; VAG1; ATP6J; Vma10; Atp6g1; AA960677; 1810024D14Rik
    Expression
    Ubiquitous expression in placenta adult (RPKM 81.5), CNS E14 (RPKM 64.5) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Atp6v1g1 in Genome Data Viewer
    Location:
    4; 4 B3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (63463002..63468938)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (63544765..63550701)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (63205799..63211735)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene AT-hook transcription factor Neighboring gene predicted gene, 52742 Neighboring gene whirlin Neighboring gene predicted gene, 38592 Neighboring gene transmembrane protein 268 Neighboring gene predicted gene, 24448 Neighboring gene predicted gene 11213

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables ATPase binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables ATPase-coupled transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables proton-transporting ATPase activity, rotational mechanism IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cellular iron ion homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to increased oxygen levels ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in intracellular anatomical structure IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in lysosomal membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    NOT located_in synaptic vesicle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of vacuolar proton-transporting V-type ATPase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    part_of vacuolar proton-transporting V-type ATPase complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    part_of vacuolar proton-transporting V-type ATPase, V1 domain ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    V-type proton ATPase subunit G 1
    Names
    ATPase, H+ transporting, V1 subunit G
    ATPase, H+ transporting, lysosomal (vacuolar proton pump)
    ATPase, H+ transporting, lysosomal 13kD, V1 subunit G
    V-ATPase 13 kDa subunit 1
    V-ATPase subunit G 1
    lysosomal 13kDa
    vacuolar proton pump subunit G 1
    NP_077135.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_024173.2NP_077135.1  V-type proton ATPase subunit G 1

      See identical proteins and their annotated locations for NP_077135.1

      Status: VALIDATED

      Source sequence(s)
      AI836426, AK007596, CN838691
      Consensus CDS
      CCDS18260.1
      UniProtKB/Swiss-Prot
      Q9CR51
      UniProtKB/TrEMBL
      Q5HZY7
      Related
      ENSMUSP00000048770.7, ENSMUST00000035301.7
      Conserved Domains (1) summary
      TIGR01147
      Location:1113
      V_ATP_synt_G; vacuolar ATP synthase, subunit G

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      63463002..63468938
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center