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    Pigyl phosphatidylinositol glycan anchor biosynthesis, class Y-like [ Mus musculus (house mouse) ]

    Gene ID: 66268, updated on 11-Apr-2024


    Official Symbol
    Pigylprovided by MGI
    Official Full Name
    phosphatidylinositol glycan anchor biosynthesis, class Y-likeprovided by MGI
    Primary source
    See related
    Ensembl:ENSMUSG00000010607 AllianceGenome:MGI:1913518
    Gene type
    protein coding
    RefSeq status
    Mus musculus
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Pigy; PIG-Y; 1810008A14Rik
    This gene encodes a homolog of a human protein that functions in glycosylphosphatidylinositol biosynthesis. The human protein is expressed from an unusual locus that encodes two distinct proteins in upstream and downstream CDSes; however, in mouse these two proteins are expressed from distinct loci. The product of this locus is highly similar to the protein expressed from the human downstream CDS. A separate mouse locus on chromosome 6 is orthologous to the human locus and encodes a protein similar to the human protein expressed from the upstream CDS. [provided by RefSeq, Jul 2008]
    Ubiquitous expression in genital fat pad adult (RPKM 30.9), ovary adult (RPKM 27.8) and 28 other tissues See more
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    Genomic context

    See Pigyl in Genome Data Viewer
    9 A3; 9 8.46 cM
    Exon count:
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (22068142..22069651)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (22156846..22158355)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene acid phosphatase 5, tartrate resistant Neighboring gene predicted gene, 39306 Neighboring gene STARR-positive B cell enhancer ABC_E1380 Neighboring gene STARR-seq mESC enhancer starr_23536 Neighboring gene zinc finger protein 867 pseudogene Neighboring gene ribosomal protein L15, pseudogene 3

    Genomic regions, transcripts, and products


    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    General protein information

    Preferred Names
    phosphatidylinositol N-acetylglucosaminyltransferase subunit Y
    phosphatidylinositol-glycan biosynthesis class Y protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001082532.1NP_001076001.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit Y

      See identical proteins and their annotated locations for NP_001076001.1

      Status: REVIEWED

      Source sequence(s)
      AI414555, AK007367, BU558514
      Consensus CDS
      ENSMUSP00000116929.2, ENSMUST00000123680.2
      Conserved Domains (1) summary
      PIG-Y; Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J


    1. NC_000075.7 Reference GRCm39 C57BL/6J

      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_025457.1: Suppressed sequence

      NM_025457.1: This RefSeq was permanently suppressed because currently there is limited support for the transcript but not the protein.