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    Eif1ax eukaryotic translation initiation factor 1A, X-linked [ Mus musculus (house mouse) ]

    Gene ID: 66235, updated on 27-Jan-2018

    Summary

    Official Symbol
    Eif1axprovided by MGI
    Official Full Name
    eukaryotic translation initiation factor 1A, X-linkedprovided by MGI
    Primary source
    MGI:MGI:1913485
    See related
    Ensembl:ENSMUSG00000067194 Vega:OTTMUSG00000019437
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Eif1ay; eIF-4C; AI426898; 1500010B24Rik
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 59.8), liver E14 (RPKM 44.2) and 27 other tissues See more
    Orthologs

    Genomic context

    See Eif1ax in Genome Data Viewer
    Location:
    X; X F4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) X NC_000086.7 (159372195..159385699)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (155810127..155823631)

    Chromosome X - NC_000086.7Genomic Context describing neighboring genes Neighboring gene heat shock protein 90 alpha (cytosolic), class B member 1 pseudogene Neighboring gene ribosomal protein S6 kinase polypeptide 3 Neighboring gene predicted gene 15187 Neighboring gene MAP7 domain containing 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    translation IEA
    Inferred from Electronic Annotation
    more info
     
    translational initiation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    eukaryotic translation initiation factor 1A, X-chromosomal
    Names
    eIF-1A X isoform
    eukaryotic translation initiation factor 1A, Y-linked
    eukaryotic translation initiation factor 4C

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025437.5NP_079713.2  eukaryotic translation initiation factor 1A, X-chromosomal

      See identical proteins and their annotated locations for NP_079713.2

      Status: VALIDATED

      Source sequence(s)
      AK166852, AL808146, CJ141723
      Consensus CDS
      CCDS41192.1
      UniProtKB/Swiss-Prot
      Q8BMJ3
      Related
      ENSMUSP00000084387.6, OTTMUSP00000020950, ENSMUST00000087143.6
      Conserved Domains (1) summary
      PTZ00329
      Location:1131
      PTZ00329; eukaryotic translation initiation factor 1A; Provisional

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000086.7 Reference GRCm38.p4 C57BL/6J

      Range
      159372195..159385699
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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