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    Tma7 translational machinery associated 7 [ Mus musculus (house mouse) ]

    Gene ID: 66167, updated on 8-Feb-2024

    Summary

    Official Symbol
    Tma7provided by MGI
    Official Full Name
    translational machinery associated 7provided by MGI
    Primary source
    MGI:MGI:1913417
    See related
    Ensembl:ENSMUSG00000091537 AllianceGenome:MGI:1913417
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ccdc72; 1110017O22Rik
    Summary
    Predicted to be involved in cytoplasmic translation. Is expressed in retina inner nuclear layer and retina outer nuclear layer. Orthologous to human TMA7 (translation machinery associated 7 homolog). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in CNS E11.5 (RPKM 90.6), placenta adult (RPKM 86.2) and 20 other tissues See more
    Orthologs
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    Genomic context

    See Tma7 in Genome Data Viewer
    Location:
    9 F2; 9 59.63 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (108907056..108911449, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (109077988..109082381, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E5107 Neighboring gene predicted gene, 53191 Neighboring gene three prime repair exonuclease 1 Neighboring gene ATR interacting protein Neighboring gene STARR-positive B cell enhancer ABC_E1794 Neighboring gene coiled-coil domain containing 51 Neighboring gene predicted gene 7628 Neighboring gene plexin B1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    translation machinery-associated protein 7
    Names
    coiled-coil domain containing 72
    coiled-coil domain-containing protein 72
    translational machinery associated 7 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_183250.2NP_899073.1  translation machinery-associated protein 7

      See identical proteins and their annotated locations for NP_899073.1

      Status: PROVISIONAL

      Source sequence(s)
      AK003762
      Consensus CDS
      CCDS52930.1
      UniProtKB/Swiss-Prot
      Q8K003
      UniProtKB/TrEMBL
      Q14A47
      Related
      ENSMUSP00000133026.2, ENSMUST00000167504.3
      Conserved Domains (1) summary
      pfam09072
      Location:364
      TMA7; Translation machinery associated TMA7

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      108907056..108911449 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)