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    Tmem14c transmembrane protein 14C [ Mus musculus (house mouse) ]

    Gene ID: 66154, updated on 23-Jun-2021

    Summary

    Official Symbol
    Tmem14cprovided by MGI
    Official Full Name
    transmembrane protein 14Cprovided by MGI
    Primary source
    MGI:MGI:1913404
    See related
    Ensembl:ENSMUSG00000021361
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    HSPC1; HSPC194; AU020193; 1110021D01Rik
    Expression
    Ubiquitous expression in liver E14 (RPKM 150.0), liver E14.5 (RPKM 146.6) and 27 other tissues See more
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    Genomic context

    See Tmem14c in Genome Data Viewer
    Location:
    13; 13 A3.3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (41169726..41176058)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (41016250..41022582)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (41111619..41117951)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene glucosaminyl (N-acetyl) transferase 2, I-branching enzyme Neighboring gene predicted gene, 31683 Neighboring gene RIKEN cDNA A730081D07 gene Neighboring gene PAK1 interacting protein 1 Neighboring gene male germ cell-associated kinase Neighboring gene glial cells missing homolog 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in mitochondrial inner membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in mitochondrial inner membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in mitochondrial membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001360770.1NP_001347699.1  transmembrane protein 14C isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC133496
      Conserved Domains (1) summary
      pfam03647
      Location:594
      Tmemb_14; Transmembrane proteins 14C
    2. NM_025387.3NP_079663.1  transmembrane protein 14C isoform 1

      See identical proteins and their annotated locations for NP_079663.1

      Status: VALIDATED

      Source sequence(s)
      AK010609, BY785978, CO039120
      Consensus CDS
      CCDS26470.1
      UniProtKB/Swiss-Prot
      Q9CQN6
      Related
      ENSMUSP00000021790.6, ENSMUST00000021790.7
      Conserved Domains (1) summary
      pfam03647
      Location:13102
      Tmemb_14; Transmembrane proteins 14C

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      41169726..41176058
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006516938.3XP_006517001.1  transmembrane protein 14C isoform X1

      See identical proteins and their annotated locations for XP_006517001.1

      UniProtKB/Swiss-Prot
      Q9CQN6
      UniProtKB/TrEMBL
      Q8C297
      Conserved Domains (1) summary
      pfam03647
      Location:594
      Tmemb_14; Transmembrane proteins 14C
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