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    Dnajc15 DnaJ heat shock protein family (Hsp40) member C15 [ Mus musculus (house mouse) ]

    Gene ID: 66148, updated on 31-Jan-2019

    Summary

    Official Symbol
    Dnajc15provided by MGI
    Official Full Name
    DnaJ heat shock protein family (Hsp40) member C15provided by MGI
    Primary source
    MGI:MGI:1913398
    See related
    Ensembl:ENSMUSG00000022013
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Dnajd1; 1110003P16Rik
    Expression
    Broad expression in testis adult (RPKM 177.3), ovary adult (RPKM 65.1) and 27 other tissues See more
    Orthologs

    Genomic context

    See Dnajc15 in Genome Data Viewer
    Location:
    14; 14 D3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 14 NC_000080.6 (77826217..77874917, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (78226024..78274724, complement)

    Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 30467 Neighboring gene predicted gene 1587 Neighboring gene epithelial stromal interaction 1 (breast) Neighboring gene family with sequence similarity 216, member B

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 
    • Targeted (2) 

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    ATPase activator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    contributes_to protein transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    cellular response to starvation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    negative regulation of mitochondrial electron transport, NADH to ubiquinone IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    negative regulation of protein complex assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    protein import into mitochondrial matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of lipid metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    PAM complex, Tim23 associated import motor IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrial inner membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    mitochondrion HDA PubMed 
    mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    dnaJ homolog subfamily C member 15
    Names
    DnaJ (Hsp40) homolog, subfamily C, member 15
    DnaJ (Hsp40) homolog, subfamily D, member 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025384.3NP_079660.1  dnaJ homolog subfamily C member 15

      See identical proteins and their annotated locations for NP_079660.1

      Status: PROVISIONAL

      Source sequence(s)
      BC027509
      Consensus CDS
      CCDS27292.1
      UniProtKB/Swiss-Prot
      Q78YY6
      Related
      ENSMUSP00000154390.1, ENSMUST00000226459.1
      Conserved Domains (1) summary
      cl02542
      Location:85142
      DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000080.6 Reference GRCm38.p4 C57BL/6J

      Range
      77826217..77874917 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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