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    Tomm6 translocase of outer mitochondrial membrane 6 [ Mus musculus (house mouse) ]

    Gene ID: 66119, updated on 23-Jun-2021

    Summary

    Official Symbol
    Tomm6provided by MGI
    Official Full Name
    translocase of outer mitochondrial membrane 6provided by MGI
    Primary source
    MGI:MGI:1913369
    See related
    Ensembl:ENSMUSG00000033475
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI663970; 1110002E23Rik
    Expression
    Ubiquitous expression in placenta adult (RPKM 33.4), stomach adult (RPKM 30.0) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Tomm6 in Genome Data Viewer
    Location:
    17; 17 C
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (47997570..47999311, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (47686645..47688386, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (47823594..47825335, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene cyclin D3 Neighboring gene bystin-like Neighboring gene predicted gene 20517 Neighboring gene mediator complex subunit 20 Neighboring gene Kpna2 retrotransposed pseudogene Neighboring gene ubiquitin specific peptidase 49 Neighboring gene prickle planar cell polarity protein 4 Neighboring gene translocase of outer mitochondrial membrane 6, opposite strand Neighboring gene fibroblast growth factor receptor substrate 3 Neighboring gene fibroblast growth factor receptor substrate 3, opposite strand

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Pathways from PubChem

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
     
    part_of mitochondrial outer membrane translocase complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion HDA PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    mitochondrial import receptor subunit TOM6 homolog
    Names
    overexpressed breast tumor protein homolog
    translocase of outer membrane 6 kDa subunit homolog
    translocase of outer mitochondrial membrane 6 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164729.1NP_001158201.1  mitochondrial import receptor subunit TOM6 homolog

      See identical proteins and their annotated locations for NP_001158201.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
      Source sequence(s)
      BC089325, CA319049, CA321392
      Consensus CDS
      CCDS37643.1
      UniProtKB/Swiss-Prot
      Q9CQN3
      Related
      ENSMUSP00000108926.2, ENSMUST00000113301.2
      Conserved Domains (1) summary
      pfam15184
      Location:174
      TOM6p; Mitochondrial import receptor subunit TOM6 homolog
    2. NM_025365.3NP_079641.1  mitochondrial import receptor subunit TOM6 homolog

      See identical proteins and their annotated locations for NP_079641.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 3' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.
      Source sequence(s)
      AK010470, BC089325, CA321392
      Consensus CDS
      CCDS37643.1
      UniProtKB/Swiss-Prot
      Q9CQN3
      Related
      ENSMUSP00000108927.4, ENSMUST00000113302.10
      Conserved Domains (1) summary
      pfam15184
      Location:174
      TOM6p; Mitochondrial import receptor subunit TOM6 homolog

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      47997570..47999311 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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