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    0610009B22Rik RIKEN cDNA 0610009B22 gene [ Mus musculus (house mouse) ]

    Gene ID: 66050, updated on 31-Jan-2019

    Summary

    Official Symbol
    0610009B22Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 0610009B22 geneprovided by MGI
    Primary source
    MGI:MGI:1913300
    See related
    Ensembl:ENSMUSG00000007777
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Ubiquitous expression in testis adult (RPKM 9.5), CNS E14 (RPKM 9.3) and 28 other tissues See more

    Genomic context

    See 0610009B22Rik in Genome Data Viewer
    Location:
    11; 11 B1.3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 11 NC_000077.6 (51685380..51689173, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (51498887..51502136, complement)

    Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA D930048N14 gene Neighboring gene NEDD4 binding protein 3 Neighboring gene predicted gene, 30058 Neighboring gene Sec24 related gene family, member A (S. cerevisiae) Neighboring gene secretion associated Ras related GTPase 1B

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Pathways from BioSystems

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC66050

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025319.2NP_079595.1  uncharacterized protein LOC66050

      See identical proteins and their annotated locations for NP_079595.1

      Status: PREDICTED

      Source sequence(s)
      AK002369
      Consensus CDS
      CCDS36149.1
      UniProtKB/Swiss-Prot
      Q9CQP2
      UniProtKB/TrEMBL
      Q8R3W2
      Related
      ENSMUSP00000007921.2, ENSMUST00000007921.8
      Conserved Domains (1) summary
      pfam04628
      Location:9136
      Sedlin_N; Sedlin, N-terminal conserved region

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000077.6 Reference GRCm38.p4 C57BL/6J

      Range
      51685380..51689173 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006533917.3XP_006533980.1  uncharacterized protein LOC66050 isoform X1

      See identical proteins and their annotated locations for XP_006533980.1

      UniProtKB/Swiss-Prot
      Q9CQP2
      UniProtKB/TrEMBL
      Q8R3W2
      Conserved Domains (1) summary
      pfam04628
      Location:9136
      Sedlin_N; Sedlin, N-terminal conserved region
    2. XM_006533918.2XP_006533981.1  uncharacterized protein LOC66050 isoform X1

      See identical proteins and their annotated locations for XP_006533981.1

      UniProtKB/Swiss-Prot
      Q9CQP2
      UniProtKB/TrEMBL
      Q8R3W2
      Related
      ENSMUSP00000104726.1, ENSMUST00000109098.1
      Conserved Domains (1) summary
      pfam04628
      Location:9136
      Sedlin_N; Sedlin, N-terminal conserved region
    3. XM_006533919.2XP_006533982.1  uncharacterized protein LOC66050 isoform X1

      See identical proteins and their annotated locations for XP_006533982.1

      UniProtKB/Swiss-Prot
      Q9CQP2
      UniProtKB/TrEMBL
      Q8R3W2
      Conserved Domains (1) summary
      pfam04628
      Location:9136
      Sedlin_N; Sedlin, N-terminal conserved region
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