U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    ZFTA zinc finger translocation associated [ Homo sapiens (human) ]

    Gene ID: 65998, updated on 5-Aug-2022

    Summary

    Official Symbol
    ZFTAprovided by HGNC
    Official Full Name
    zinc finger translocation associatedprovided by HGNC
    Primary source
    HGNC:HGNC:28449
    See related
    Ensembl:ENSG00000188070 MIM:615699; AllianceGenome:HGNC:28449
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C11orf95
    Summary
    Predicted to be involved in negative regulation of transcription, DNA-templated. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in ovary (RPKM 10.0), endometrium (RPKM 8.7) and 25 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See ZFTA in Genome Data Viewer
    Location:
    11q13.1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    110 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (63759892..63768775, complement)
    110 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (63749259..63758142, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (63527364..63536247, complement)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene inner mitochondrial membrane peptidase subunit 1 pseudogene 1 Neighboring gene atlastin GTPase 3 Neighboring gene reticulon 3 Neighboring gene RNA, 7SL, cytoplasmic 596, pseudogene Neighboring gene spindlin interactor and repressor of chromatin binding

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Homology

    Clone Names

    • MGC3032

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    zinc finger translocation-associated protein
    Names
    uncharacterized protein C11orf95

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001144936.2NP_001138408.1  zinc finger translocation-associated protein

      See identical proteins and their annotated locations for NP_001138408.1

      Status: VALIDATED

      Source sequence(s)
      AP006289
      Consensus CDS
      CCDS44636.1
      UniProtKB/Swiss-Prot
      C9JLR9, Q3C1V4
      Related
      ENSP00000482180.1, ENST00000433688.2

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      63759892..63768775 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024448662.2XP_024304430.1  zinc finger translocation-associated protein isoform X3

    2. XM_047427477.1XP_047283433.1  zinc finger translocation-associated protein isoform X1

    3. XM_047427478.1XP_047283434.1  zinc finger translocation-associated protein isoform X2

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      63749259..63758142 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_023941.1: Suppressed sequence

      Description
      NM_023941.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.