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    Utp3 UTP3 small subunit processome component [ Mus musculus (house mouse) ]

    Gene ID: 65961, updated on 23-Jun-2021

    Summary

    Official Symbol
    Utp3provided by MGI
    Official Full Name
    UTP3 small subunit processome componentprovided by MGI
    Primary source
    MGI:MGI:1919230
    See related
    Ensembl:ENSMUSG00000070697
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Crl; Crl1; Crl-1; Crlz1; Sas10; C87704; AW557551; 2400011K09Rik
    Orthologs
    NEW
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    Genomic context

    See Utp3 in Genome Data Viewer
    Location:
    5; 5 E1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (88702321..88703949)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (88554462..88556090)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (88983508..88985108)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene enamelin Neighboring gene immunoglobulin joining chain Neighboring gene predicted gene, 42107 Neighboring gene RUN and FYVE domain containing 3 Neighboring gene G-rich RNA sequence binding factor 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    part_of small-subunit processome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    something about silencing protein 10
    Names
    UTP3 homolog
    charged amino acid-rich leucine zipper 1
    disrupter of silencing SAS10

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_023054.2NP_075541.1  something about silencing protein 10

      See identical proteins and their annotated locations for NP_075541.1

      Status: VALIDATED

      Source sequence(s)
      AK145637, BF458645
      Consensus CDS
      CCDS19402.1
      UniProtKB/Swiss-Prot
      Q9JI13
      Related
      ENSMUSP00000087896.5, ENSMUST00000090413.6
      Conserved Domains (2) summary
      pfam04000
      Location:226305
      Sas10_Utp3; Sas10/Utp3/C1D family
      pfam09368
      Location:398468
      Sas10; Sas10 C-terminal domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      88702321..88703949
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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