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    Arl6ip6 ADP-ribosylation factor-like 6 interacting protein 6 [ Mus musculus (house mouse) ]

    Gene ID: 65103, updated on 31-Jan-2019

    Summary

    Official Symbol
    Arl6ip6provided by MGI
    Official Full Name
    ADP-ribosylation factor-like 6 interacting protein 6provided by MGI
    Primary source
    MGI:MGI:1929507
    See related
    Ensembl:ENSMUSG00000026960
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Aip-6; 2310057C01Rik; 2610529A11Rik
    Expression
    Ubiquitous expression in testis adult (RPKM 18.5), CNS E11.5 (RPKM 11.8) and 28 other tissues See more
    Orthologs

    Genomic context

    See Arl6ip6 in Genome Data Viewer
    Location:
    2; 2 C1.1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (53192084..53219221)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (53051118..53078255)

    Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene formin-like 2 Neighboring gene pre-mRNA processing factor 40A Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene predicted gene 13503

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ADP-ribosylation factor-like protein 6-interacting protein 6
    Names
    ADP-ribosylation-like factor 6 interacting protein 6
    ARL-6-interacting protein 6

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_022989.4NP_075365.3  ADP-ribosylation factor-like protein 6-interacting protein 6

      See identical proteins and their annotated locations for NP_075365.3

      Status: VALIDATED

      Source sequence(s)
      AK082824, AL844552, AL845170
      Consensus CDS
      CCDS16039.1
      UniProtKB/Swiss-Prot
      Q8BH07
      Related
      ENSMUSP00000028336.6, ENSMUST00000028336.6
      Conserved Domains (1) summary
      pfam15062
      Location:138214
      ARL6IP6; Haemopoietic lineage transmembrane helix

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

      Range
      53192084..53219221
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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