Format

Send to:

Choose Destination
    • Showing Current items.

    Rpl34-ps1 ribosomal protein L34, pseudogene 1 [ Mus musculus (house mouse) ]

    Gene ID: 619547, updated on 23-Jun-2021

    Summary

    Official Symbol
    Rpl34-ps1provided by MGI
    Official Full Name
    ribosomal protein L34, pseudogene 1provided by MGI
    Primary source
    MGI:MGI:3704270
    See related
    Ensembl:ENSMUSG00000068396
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm10239; EG619547
    Annotation information
    Note: It is unclear whether this locus is a functional gene or a pseudogene. However, the locus has transcript support and an intact open reading frame so it is represented as protein-coding in Gene and RefSeq. [03 Dec 2010]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Rpl34-ps1 in Genome Data Viewer
    Location:
    6; 6 C1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (71101573..71101985)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (71124589..71125001)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (71074588..71074995)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23485 Neighboring gene predicted gene, 38826 Neighboring gene threonine synthase-like 2 (bacterial) Neighboring gene predicted gene, 30391

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    • Homologs of the Rpl34-ps1 gene: The Rpl34-ps1 gene is conserved in Rhesus monkey, dog, cow, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
    • Orthologs

    Clone Names

    • MGC103270, MGC117759

    General protein information

    Preferred Names
    ribosomal protein L34, pseudogene 1
    Names
    ribosomal protein L34 pseudogene

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001199350.1NP_001186279.1  ribosomal protein L34, pseudogene 1

      See identical proteins and their annotated locations for NP_001186279.1

      Status: PROVISIONAL

      Source sequence(s)
      BC100360
      UniProtKB/Swiss-Prot
      Q9D1R9
      Related
      ENSMUST00000121998.2
      Conserved Domains (1) summary
      pfam01199
      Location:196
      Ribosomal_L34e; Ribosomal protein L34e

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      71101573..71101985
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_005329.9: Suppressed sequence

      Description
      NG_005329.9: This RefSeq was permanently suppressed because it is now thought that this gene does encode a protein.
    Support Center