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    Mrps30 mitochondrial ribosomal protein S30 [ Mus musculus (house mouse) ]

    Gene ID: 59054, updated on 23-Jun-2021

    Summary

    Official Symbol
    Mrps30provided by MGI
    Official Full Name
    mitochondrial ribosomal protein S30provided by MGI
    Primary source
    MGI:MGI:1926237
    See related
    Ensembl:ENSMUSG00000021731
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    PAP; Pdcd; Pdcd9; AA968347; 2610020A16Rik
    Expression
    Ubiquitous expression in adrenal adult (RPKM 73.6), ovary adult (RPKM 53.7) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Mrps30 in Genome Data Viewer
    Location:
    13; 13 D2.3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (118516646..118523788, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (118380110..118387252, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (119168917..119176059, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 26349 Neighboring gene ribosomal protein S8 pseudogene Neighboring gene VISTA enhancer mm463 Neighboring gene RIKEN cDNA 1700003P14 gene Neighboring gene predicted gene 9098

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    part_of mitochondrial large ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    28S ribosomal protein S30, mitochondrial
    Names
    MRP-S30
    S30mt
    programmed cell death 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_021556.3NP_067531.1  28S ribosomal protein S30, mitochondrial

      See identical proteins and their annotated locations for NP_067531.1

      Status: PROVISIONAL

      Source sequence(s)
      AK011476
      Consensus CDS
      CCDS26794.1
      UniProtKB/Swiss-Prot
      Q9D0G0
      Related
      ENSMUSP00000022245.9, ENSMUST00000022245.10
      Conserved Domains (1) summary
      pfam07147
      Location:1420
      PDCD9; Mitochondrial 28S ribosomal protein S30 (PDCD9)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      118516646..118523788 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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