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    Slc35b4 solute carrier family 35, member B4 [ Mus musculus (house mouse) ]

    Gene ID: 58246, updated on 23-Jun-2021

    Summary

    Official Symbol
    Slc35b4provided by MGI
    Official Full Name
    solute carrier family 35, member B4provided by MGI
    Primary source
    MGI:MGI:1931249
    See related
    Ensembl:ENSMUSG00000018999
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AB041549; AW494345; 4930474D06Rik
    Expression
    Ubiquitous expression in kidney adult (RPKM 32.1), genital fat pad adult (RPKM 17.7) and 27 other tissues See more
    Orthologs
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    Genomic context

    See Slc35b4 in Genome Data Viewer
    Location:
    6; 6 A3.3
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (34130357..34154012, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (34155872..34177054, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (34105879..34127054, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene predicted gene 13853 Neighboring gene predicted gene, 38786 Neighboring gene leucine-rich repeats and guanylate kinase domain containing Neighboring gene predicted gene 13855 Neighboring gene predicted gene, 32533 Neighboring gene aldo-keto reductase family 1, member B3 (aldose reductase)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Pathways from PubChem

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables UDP-N-acetylglucosamine transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables UDP-N-acetylglucosamine transmembrane transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables UDP-xylose transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables UDP-xylose transmembrane transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in UDP-N-acetylglucosamine transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in UDP-xylose transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within carbohydrate transport IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within regulation of gluconeogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in integral component of Golgi membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    is_active_in integral component of endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    UDP-xylose and UDP-N-acetylglucosamine transporter

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_021435.3NP_067410.1  UDP-xylose and UDP-N-acetylglucosamine transporter

      See identical proteins and their annotated locations for NP_067410.1

      Status: PROVISIONAL

      Source sequence(s)
      AC153817
      Consensus CDS
      CCDS19989.1
      UniProtKB/Swiss-Prot
      Q8CIA5
      Related
      ENSMUSP00000019143.9, ENSMUST00000019143.9
      Conserved Domains (2) summary
      pfam08449
      Location:2314
      UAA; UAA transporter family
      cl23754
      Location:87310
      EamA; EamA-like transporter family

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      34130357..34154012 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011241421.4XP_011239723.1  UDP-xylose and UDP-N-acetylglucosamine transporter isoform X1

      Conserved Domains (1) summary
      pfam08449
      Location:1246
      UAA; UAA transporter family
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