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    Dnajc4 DnaJ heat shock protein family (Hsp40) member C4 [ Mus musculus (house mouse) ]

    Gene ID: 57431, updated on 31-Jan-2019

    Summary

    Official Symbol
    Dnajc4provided by MGI
    Official Full Name
    DnaJ heat shock protein family (Hsp40) member C4provided by MGI
    Primary source
    MGI:MGI:1927346
    See related
    Ensembl:ENSMUSG00000024963
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hspf2; Mcg18
    Expression
    Ubiquitous expression in testis adult (RPKM 41.6), colon adult (RPKM 24.7) and 28 other tissues See more
    Orthologs

    Genomic context

    See Dnajc4 in Genome Data Viewer
    Location:
    19; 19 A
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 19 NC_000085.6 (6987911..6992697, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (7062401..7066762, complement)

    Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene FK506 binding protein 2 Neighboring gene predicted gene, 41803 Neighboring gene vascular endothelial growth factor B Neighboring gene predicted gene, 35838 Neighboring gene nudix (nucleoside diphosphate linked moiety X)-type motif 22 Neighboring gene tRNA phosphotransferase 1 Neighboring gene fermitin family member 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Clone Names

    • 2010301J22Rik

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrion HDA PubMed 

    General protein information

    Preferred Names
    dnaJ homolog subfamily C member 4
    Names
    DnaJ (Hsp40) homolog, subfamily C, member 4
    heat shock 40kD protein 2
    multiple endocrine neoplasia type 1 candidate protein 18
    multiple endocrine neoplasia type 1 candidate protein number 18 homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001356999.1NP_001343928.1  dnaJ homolog subfamily C member 4 isoform a precursor

      Status: VALIDATED

      Source sequence(s)
      AC120557, AK008507
      Conserved Domains (1) summary
      pfam00226
      Location:53115
      DnaJ; DnaJ domain
    2. NM_001357000.1NP_001343929.1  dnaJ homolog subfamily C member 4 isoform a precursor

      Status: VALIDATED

      Source sequence(s)
      AC120557
      Conserved Domains (1) summary
      pfam00226
      Location:53115
      DnaJ; DnaJ domain
    3. NM_001357001.1NP_001343930.1  dnaJ homolog subfamily C member 4 isoform b

      Status: VALIDATED

      Source sequence(s)
      AC120557
      Conserved Domains (1) summary
      pfam00226
      Location:3799
      DnaJ; DnaJ domain
    4. NM_020566.2NP_065591.1  dnaJ homolog subfamily C member 4 isoform c

      See identical proteins and their annotated locations for NP_065591.1

      Status: VALIDATED

      Source sequence(s)
      AC120557, AF036875
      Consensus CDS
      CCDS50374.1
      UniProtKB/Swiss-Prot
      Q9D844
      Related
      ENSMUSP00000136062.1, ENSMUST00000179118.1
      Conserved Domains (2) summary
      COG0484
      Location:3599
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      pfam00226
      Location:3799
      DnaJ; DnaJ domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000085.6 Reference GRCm38.p4 C57BL/6J

      Range
      6987911..6992697 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006527237.3XP_006527300.1  dnaJ homolog subfamily C member 4 isoform X1

      Conserved Domains (2) summary
      COG0484
      Location:61125
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      pfam00226
      Location:63125
      DnaJ; DnaJ domain
    2. XM_006527239.3XP_006527302.1  dnaJ homolog subfamily C member 4 isoform X3

      Related
      ENSMUSP00000025915.5, ENSMUST00000025915.11
      Conserved Domains (1) summary
      pfam00226
      Location:53115
      DnaJ; DnaJ domain
    3. XM_011247304.2XP_011245606.1  dnaJ homolog subfamily C member 4 isoform X2

      Conserved Domains (2) summary
      COG0484
      Location:61125
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      pfam00226
      Location:63125
      DnaJ; DnaJ domain
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