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    Atp5j2 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2 [ Mus musculus (house mouse) ]

    Gene ID: 57423, updated on 31-Jan-2019

    Summary

    Official Symbol
    Atp5j2provided by MGI
    Official Full Name
    ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2provided by MGI
    Primary source
    MGI:MGI:1927558
    See related
    Ensembl:ENSMUSG00000038690
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Atp5mf; 1110019H14Rik
    Expression
    Ubiquitous expression in heart adult (RPKM 396.0), kidney adult (RPKM 214.0) and 28 other tissues See more
    Orthologs

    Genomic context

    See Atp5j2 in Genome Data Viewer
    Location:
    5; 5 G2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 5 NC_000071.6 (145183706..145191592, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (145944575..145952461, complement)

    Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene BUD31 homolog Neighboring gene pentatricopeptide repeat domain 1 Neighboring gene cleavage and polyadenylation specific factor 4 Neighboring gene zinc finger with KRAB and SCAN domains 14 Neighboring gene zinc finger with KRAB and SCAN domains 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    contributes_to ATPase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    ATP biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    ATP metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrial inner membrane HDA PubMed 
    mitochondrial proton-transporting ATP synthase complex ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrion HDA PubMed 
    mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    proton-transporting ATP synthase complex, coupling factor F(o) IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ATP synthase subunit f, mitochondrial
    Names
    ATP synthase membrane subunit f
    ATP synthase, H+ transporting, mitochondrial F0 complex, subunit f, isoform 2
    hypothetical protein, clone:2-31
    NP_065607.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_020582.2NP_065607.1  ATP synthase subunit f, mitochondrial

      See identical proteins and their annotated locations for NP_065607.1

      Status: PROVISIONAL

      Source sequence(s)
      AB030192
      Consensus CDS
      CCDS39385.1
      UniProtKB/Swiss-Prot
      P56135
      Related
      ENSMUSP00000125504.1, ENSMUST00000161741.7
      Conserved Domains (1) summary
      pfam10206
      Location:884
      WRW; Mitochondrial F1F0-ATP synthase, subunit f

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000071.6 Reference GRCm38.p4 C57BL/6J

      Range
      145183706..145191592 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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