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    APMAP adipocyte plasma membrane associated protein [ Homo sapiens (human) ]

    Gene ID: 57136, updated on 23-Nov-2021

    Summary

    Official Symbol
    APMAPprovided by HGNC
    Official Full Name
    adipocyte plasma membrane associated proteinprovided by HGNC
    Primary source
    HGNC:HGNC:13238
    See related
    Ensembl:ENSG00000101474 MIM:615884
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    BSCv; C20orf3
    Expression
    Ubiquitous expression in thyroid (RPKM 46.5), fat (RPKM 34.1) and 24 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See APMAP in Genome Data Viewer
    Location:
    20p11.21
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    109.20211119 current GRCh38.p13 (GCF_000001405.39) 20 NC_000020.11 (24962925..24992930, complement)
    105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (24943561..24973387, complement)

    Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372578 Neighboring gene cystatin F Neighboring gene RNA, U6 small nuclear 1257, pseudogene Neighboring gene acyl-CoA synthetase short chain family member 1 Neighboring gene visual system homeobox 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables arylesterase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables strictosidine synthase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cell surface IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane HDA PubMed 
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    adipocyte plasma membrane-associated protein
    Names
    protein BSCv

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_020531.3NP_065392.1  adipocyte plasma membrane-associated protein

      See identical proteins and their annotated locations for NP_065392.1

      Status: VALIDATED

      Source sequence(s)
      AK026866, AL035661, BG773501, CF131759
      Consensus CDS
      CCDS13166.1
      UniProtKB/Swiss-Prot
      Q9HDC9
      Related
      ENSP00000217456.2, ENST00000217456.3
      Conserved Domains (4) summary
      COG3386
      Location:73320
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
      cd05819
      Location:102137
      NHL; NHL repeat [structural motif]
      cl18310
      Location:96284
      NHL; NHL repeat unit of beta-propeller proteins
      cl22863
      Location:201288
      Str_synth; Strictosidine synthase

    RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000020.11 Reference GRCh38.p13 Primary Assembly

      Range
      24962925..24992930 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005260763.3XP_005260820.1  adipocyte plasma membrane-associated protein isoform X1

      UniProtKB/Swiss-Prot
      Q9HDC9
      Conserved Domains (3) summary
      cd05819
      Location:102137
      NHL; NHL repeat [structural motif]
      cl18310
      Location:96282
      NHL; NHL repeat unit of beta-propeller proteins
      cl22863
      Location:201287
      Str_synth; Strictosidine synthase
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