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    Cript cysteine-rich PDZ-binding protein [ Mus musculus (house mouse) ]

    Gene ID: 56724, updated on 11-Mar-2018

    Summary

    Official Symbol
    Criptprovided by MGI
    Official Full Name
    cysteine-rich PDZ-binding proteinprovided by MGI
    Primary source
    MGI:MGI:1929655
    See related
    Ensembl:ENSMUSG00000024146 Vega:OTTMUSG00000028497
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AA589469; 1200020A08Rik
    Expression
    Ubiquitous expression in CNS E18 (RPKM 26.6), placenta adult (RPKM 25.0) and 23 other tissues See more
    Orthologs

    Genomic context

    See Cript in Genome Data Viewer
    Location:
    17; 17 E4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 17 NC_000083.6 (87025561..87035808)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (87424901..87435148)

    Chromosome 17 - NC_000083.6Genomic Context describing neighboring genes Neighboring gene ATPase, H+ transporting, lysosomal V1 subunit E2 Neighboring gene ras homolog family member Q Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class F Neighboring gene predicted gene, 30421 Neighboring gene thioredoxin domain containing 14 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Transposon induced (1) 
    • Targeted (2) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    PDZ domain binding ISO
    Inferred from Sequence Orthology
    more info
     
    microtubule binding ISO
    Inferred from Sequence Orthology
    more info
     
    protein-containing complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    scaffold protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    cytoplasmic microtubule organization ISO
    Inferred from Sequence Orthology
    more info
     
    establishment of protein localization ISO
    Inferred from Sequence Orthology
    more info
     
    protein localization to microtubule ISO
    Inferred from Sequence Orthology
    more info
     
    regulation of postsynaptic density protein 95 clustering ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    cell junction IEA
    Inferred from Electronic Annotation
    more info
     
    cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    dendrite ISO
    Inferred from Sequence Orthology
    more info
     
    dendritic shaft ISO
    Inferred from Sequence Orthology
    more info
     
    dendritic spine ISO
    Inferred from Sequence Orthology
    more info
     
    fibrillar center ISO
    Inferred from Sequence Orthology
    more info
     
    neuronal cell body ISO
    Inferred from Sequence Orthology
    more info
     
    nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    postsynaptic density ISO
    Inferred from Sequence Orthology
    more info
     
    synapse IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cysteine-rich PDZ-binding protein
    Names
    cysteine-rich interactor of PDZ three
    cysteine-rich interactor of PDZ3
    postsynaptic protein Cript

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_019936.3NP_064320.1  cysteine-rich PDZ-binding protein

      See identical proteins and their annotated locations for NP_064320.1

      Status: VALIDATED

      Source sequence(s)
      AK004828, AK029409, BY123761
      Consensus CDS
      CCDS29012.1
      UniProtKB/Swiss-Prot
      O70333
      Related
      ENSMUSP00000024959.3, OTTMUSP00000036020, ENSMUST00000024959.9, OTTMUST00000070625
      Conserved Domains (1) summary
      pfam10235
      Location:1199
      Cript; Microtubule-associated protein CRIPT

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000083.6 Reference GRCm38.p4 C57BL/6J

      Range
      87025561..87035808
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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