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    Ankrd49 ankyrin repeat domain 49 [ Mus musculus (house mouse) ]

    Gene ID: 56503, updated on 31-Jan-2019

    Summary

    Official Symbol
    Ankrd49provided by MGI
    Official Full Name
    ankyrin repeat domain 49provided by MGI
    Primary source
    MGI:MGI:1930842
    See related
    Ensembl:ENSMUSG00000031931
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gbif; C86108; AW060934
    Expression
    Broad expression in testis adult (RPKM 10.2), liver E14 (RPKM 7.8) and 24 other tissues See more
    Orthologs

    Genomic context

    See Ankrd49 in Genome Data Viewer
    Location:
    9; 9 A2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 9 NC_000075.6 (14779782..14784601, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (14584642..14587408, complement)

    Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700012B09 gene Neighboring gene fucosyltransferase 4 Neighboring gene MRE11A homolog A, double strand break repair nuclease Neighboring gene macrophage migration inhibitory factor, pseudogene 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC25252

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of transcription, DNA-templated ISO
    Inferred from Sequence Orthology
    more info
     
    spermatogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ankyrin repeat domain-containing protein 49
    Names
    fetal globin inducing factor
    fetal globin-increasing factor
    globin inducing factor, fetal

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001348260.1NP_001335189.1  ankyrin repeat domain-containing protein 49

      Status: VALIDATED

      Source sequence(s)
      AK132850, AK137504, BY547905, CD548941, CF105634, CT030247
      UniProtKB/Swiss-Prot
      Q8VE42
      Conserved Domains (2) summary
      cd00204
      Location:77194
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:77104
      ANK; ANK repeat [structural motif]
    2. NM_019683.4NP_062657.2  ankyrin repeat domain-containing protein 49

      See identical proteins and their annotated locations for NP_062657.2

      Status: VALIDATED

      Source sequence(s)
      AK132850, AK137504, BY204553, BY547905, CD548941
      Consensus CDS
      CCDS22826.1
      UniProtKB/Swiss-Prot
      Q8VE42
      Related
      ENSMUSP00000034406.3, ENSMUST00000034406.3
      Conserved Domains (2) summary
      cd00204
      Location:77194
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:77104
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000075.6 Reference GRCm38.p4 C57BL/6J

      Range
      14779782..14784601 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006510504.2XP_006510567.1  ankyrin repeat domain-containing protein 49 isoform X1

      Related
      ENSMUSP00000151079.1, ENSMUST00000216372.1
      Conserved Domains (2) summary
      cd00204
      Location:77194
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:77104
      ANK; ANK repeat [structural motif]
    2. XM_006510505.2XP_006510568.1  ankyrin repeat domain-containing protein 49 isoform X1

      Related
      ENSMUSP00000149874.1, ENSMUST00000216037.1
      Conserved Domains (2) summary
      cd00204
      Location:77194
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:77104
      ANK; ANK repeat [structural motif]
    3. XM_006510503.2XP_006510566.1  ankyrin repeat domain-containing protein 49 isoform X1

      See identical proteins and their annotated locations for XP_006510566.1

      UniProtKB/Swiss-Prot
      Q8VE42
      Conserved Domains (2) summary
      cd00204
      Location:77194
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:77104
      ANK; ANK repeat [structural motif]
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