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    Mtch1 mitochondrial carrier 1 [ Mus musculus (house mouse) ]

    Gene ID: 56462, updated on 23-Jun-2021

    Summary

    Official Symbol
    Mtch1provided by MGI
    Official Full Name
    mitochondrial carrier 1provided by MGI
    Primary source
    MGI:MGI:1929261
    See related
    Ensembl:ENSMUSG00000024012
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    PSAP; C77849; AI255158; AU018396; 2310034O17Rik
    Expression
    Ubiquitous expression in colon adult (RPKM 154.2), genital fat pad adult (RPKM 153.6) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Mtch1 in Genome Data Viewer
    Location:
    17; 17 A3.3
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (29551050..29566921, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (29332076..29347947, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (29469021..29484849, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene predicted pseudogene 10045 Neighboring gene predicted gene, 46603 Neighboring gene peptidase inhibitor 16 Neighboring gene FYVE, RhoGEF and PH domain containing 2 Neighboring gene VISTA enhancer mm81 Neighboring gene predicted gene, 36486 Neighboring gene predicted gene, 36199

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion HDA PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    mitochondrial carrier homolog 1
    Names
    mitochondrial carrier-like protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001347335.1NP_001334264.1  mitochondrial carrier homolog 1 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC162182, CD740861
      Consensus CDS
      CCDS84288.1
      UniProtKB/Swiss-Prot
      Q791T5
      Related
      ENSMUSP00000113021.2, ENSMUST00000118366.9
      Conserved Domains (1) summary
      pfam00153
      Location:206264
      Mito_carr; Mitochondrial carrier protein
    2. NM_001357762.1NP_001344691.1  mitochondrial carrier homolog 1 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AA215277, AC162182
      Consensus CDS
      CCDS89048.1
      Related
      ENSMUSP00000157010.2, ENSMUST00000234507.2
      Conserved Domains (1) summary
      pfam00153
      Location:94152
      Mito_carr; Mitochondrial carrier protein
    3. NM_001357763.1NP_001344692.1  mitochondrial carrier homolog 1 isoform 4

      Status: VALIDATED

      Source sequence(s)
      AA215277, AC162182
      Consensus CDS
      CCDS89049.1
      Related
      ENSMUSP00000157094.2, ENSMUST00000235088.2
      Conserved Domains (1) summary
      pfam00153
      Location:94152
      Mito_carr; Mitochondrial carrier protein
    4. NM_019880.4NP_063933.1  mitochondrial carrier homolog 1 isoform 1

      See identical proteins and their annotated locations for NP_063933.1

      Status: VALIDATED

      Source sequence(s)
      AC162182
      Consensus CDS
      CCDS28596.1
      UniProtKB/Swiss-Prot
      Q791T5
      Related
      ENSMUSP00000093077.5, ENSMUST00000095427.12
      Conserved Domains (1) summary
      pfam00153
      Location:206264
      Mito_carr; Mitochondrial carrier protein

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      29551050..29566921 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006524668.2XP_006524731.1  mitochondrial carrier homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_006524731.1

      UniProtKB/Swiss-Prot
      Q791T5
      Conserved Domains (1) summary
      pfam00153
      Location:206264
      Mito_carr; Mitochondrial carrier protein
    2. XM_006524670.3XP_006524733.1  mitochondrial carrier homolog 1 isoform X2

      See identical proteins and their annotated locations for XP_006524733.1

      UniProtKB/Swiss-Prot
      Q791T5
      Conserved Domains (1) summary
      pfam00153
      Location:206264
      Mito_carr; Mitochondrial carrier protein
    3. XM_036160691.1XP_036016584.1  mitochondrial carrier homolog 1 isoform X3

      Related
      ENSMUSP00000157218.2, ENSMUST00000235021.2
      Conserved Domains (1) summary
      pfam00153
      Location:94152
      Mito_carr; Mitochondrial carrier protein
    4. XM_030249918.2XP_030105778.1  mitochondrial carrier homolog 1 isoform X4

      Related
      ENSMUSP00000115027.3, ENSMUST00000153658.3
      Conserved Domains (1) summary
      pfam00153
      Location:94152
      Mito_carr; Mitochondrial carrier protein
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