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    Mtch1 mitochondrial carrier 1 [ Mus musculus (house mouse) ]

    Gene ID: 56462, updated on 9-Sep-2018

    Summary

    Official Symbol
    Mtch1provided by MGI
    Official Full Name
    mitochondrial carrier 1provided by MGI
    Primary source
    MGI:MGI:1929261
    See related
    Ensembl:ENSMUSG00000024012 Vega:OTTMUSG00000028973
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    PSAP; C77849; AI255158; AU018396; 2310034O17Rik
    Expression
    Ubiquitous expression in colon adult (RPKM 154.2), genital fat pad adult (RPKM 153.6) and 28 other tissues See more
    Orthologs

    Genomic context

    See Mtch1 in Genome Data Viewer
    Location:
    17; 17 A3.3
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 17 NC_000083.6 (29332076..29347927, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (29469021..29484849, complement)

    Chromosome 17 - NC_000083.6Genomic Context describing neighboring genes Neighboring gene predicted pseudogene 10045 Neighboring gene predicted gene, 46603 Neighboring gene peptidase inhibitor 16 Neighboring gene FYVE, RhoGEF and PH domain containing 2 Neighboring gene predicted gene, 36486 Neighboring gene predicted gene, 36199

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    activation of cysteine-type endopeptidase activity involved in apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of apoptotic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrion HDA PubMed 
    mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    mitochondrial carrier homolog 1
    Names
    mitochondrial carrier-like protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001347335.1NP_001334264.1  mitochondrial carrier homolog 1 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC162182, CD740861
      Consensus CDS
      CCDS84288.1
      UniProtKB/Swiss-Prot
      Q791T5
      Conserved Domains (2) summary
      cl27351
      Location:3793
      E3_binding; e3 binding domain
      cl28162
      Location:206264
      Mito_carr; Mitochondrial carrier protein
    2. NM_001357762.1NP_001344691.1  mitochondrial carrier homolog 1 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AA215277, AC162182
      Conserved Domains (1) summary
      cl28162
      Location:94152
      Mito_carr; Mitochondrial carrier protein
    3. NM_001357763.1NP_001344692.1  mitochondrial carrier homolog 1 isoform 4

      Status: VALIDATED

      Source sequence(s)
      AA215277, AC162182
      Conserved Domains (1) summary
      cl28162
      Location:94152
      Mito_carr; Mitochondrial carrier protein
    4. NM_019880.4NP_063933.1  mitochondrial carrier homolog 1 isoform 1

      See identical proteins and their annotated locations for NP_063933.1

      Status: VALIDATED

      Source sequence(s)
      AC162182
      Consensus CDS
      CCDS28596.1
      UniProtKB/Swiss-Prot
      Q791T5
      Related
      ENSMUSP00000093077.4, OTTMUSP00000036870, ENSMUST00000095427.10
      Conserved Domains (1) summary
      cl28162
      Location:206264
      Mito_carr; Mitochondrial carrier protein

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000083.6 Reference GRCm38.p4 C57BL/6J

      Range
      29332076..29347927 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006524670.1XP_006524733.1  mitochondrial carrier homolog 1 isoform X2

      See identical proteins and their annotated locations for XP_006524733.1

      UniProtKB/Swiss-Prot
      Q791T5
      Conserved Domains (2) summary
      cl27351
      Location:3793
      E3_binding; e3 binding domain
      cl28162
      Location:206264
      Mito_carr; Mitochondrial carrier protein
    2. XM_006524668.1XP_006524731.1  mitochondrial carrier homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_006524731.1

      UniProtKB/Swiss-Prot
      Q791T5
      Conserved Domains (1) summary
      cl28162
      Location:206264
      Mito_carr; Mitochondrial carrier protein
    3. XM_006524669.2XP_006524732.1  mitochondrial carrier homolog 1 isoform X2

      Related
      ENSMUSP00000113021.1, OTTMUSP00000036904, ENSMUST00000118366.7, OTTMUST00000071869
      Conserved Domains (2) summary
      cl27351
      Location:3793
      E3_binding; e3 binding domain
      cl28162
      Location:206264
      Mito_carr; Mitochondrial carrier protein
    4. XM_011246540.2XP_011244842.1  mitochondrial carrier homolog 1 isoform X3

      Conserved Domains (1) summary
      cl28162
      Location:94152
      Mito_carr; Mitochondrial carrier protein
    5. XM_017317585.1XP_017173074.1  mitochondrial carrier homolog 1 isoform X4

      Conserved Domains (1) summary
      cl28162
      Location:94152
      Mito_carr; Mitochondrial carrier protein
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