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    Zmym3 zinc finger, MYM-type 3 [ Mus musculus (house mouse) ]

    Gene ID: 56364, updated on 23-Jun-2021

    Summary

    Official Symbol
    Zmym3provided by MGI
    Official Full Name
    zinc finger, MYM-type 3provided by MGI
    Primary source
    MGI:MGI:1927231
    See related
    Ensembl:ENSMUSG00000031310
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Zfp26; Zfp261; DXS6673; AW122925; DXHXS6673; DXS6673El; 9030216B10Rik
    Expression
    Ubiquitous expression in CNS E18 (RPKM 30.8), whole brain E14.5 (RPKM 23.3) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Zmym3 in Genome Data Viewer
    Location:
    X D; X 44.1 cM
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) X NC_000086.8 (100447990..100464986, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (101404384..101421385, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (98599723..98616024, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 31385 Neighboring gene gap junction protein, beta 1 Neighboring gene non-POU-domain-containing, octamer binding protein Neighboring gene integrin beta 1 binding protein 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC118059

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in cytoskeleton organization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of cell morphogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    zinc finger MYM-type protein 3
    Names
    zinc finger protein 261

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001177985.1NP_001171456.1  zinc finger MYM-type protein 3 isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR and lacks alternate in-frame exon in the 3' coding region compared to variant 1. The resulting protein (isoform 2) is shorter compared to isoform 1.
      Source sequence(s)
      AL831722
      Consensus CDS
      CCDS53155.1
      UniProtKB/TrEMBL
      B1AXS6
      Related
      ENSMUSP00000112497.2, ENSMUST00000117901.8
      Conserved Domains (4) summary
      smart00746
      Location:313349
      TRASH; metallochaperone-like domain
      pfam06467
      Location:347391
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam10577
      Location:169290
      UPF0560; uncharacterized protein family UPF0560
      cl00213
      Location:11751260
      DNA_BRE_C; DNA breaking-rejoining enzymes, C-terminal catalytic domain
    2. NM_001177986.1NP_001171457.1  zinc finger MYM-type protein 3 isoform 3

      See identical proteins and their annotated locations for NP_001171457.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) differs in 5' UTR and in the 3' coding region and UTR compared to variant 1. The resulting protein (isoform 3) is shorter and has a distinct C-terminus compared to isoform 1.
      Source sequence(s)
      AK033470, AL831722
      Consensus CDS
      CCDS53154.1
      UniProtKB/TrEMBL
      Q8CG95
      Related
      ENSMUSP00000114005.2, ENSMUST00000120201.8
      Conserved Domains (3) summary
      smart00746
      Location:313349
      TRASH; metallochaperone-like domain
      pfam06467
      Location:347391
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam10577
      Location:169280
      UPF0560; uncharacterized protein family UPF0560
    3. NM_001177987.1NP_001171458.1  zinc finger MYM-type protein 3 isoform 4

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) differs in the 5' UTR and CDS which results in the use of an upstream start site, and in the 3' coding region and UTR compared to variant 1. The resulting protein (isoform 4) is shorter and has distinct N- and C-termini compared to isoform 1.
      Source sequence(s)
      BC082320
      UniProtKB/TrEMBL
      Q8CG95
      Conserved Domains (3) summary
      smart00746
      Location:356392
      TRASH; metallochaperone-like domain
      pfam06467
      Location:390434
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam10577
      Location:212323
      UPF0560; uncharacterized protein family UPF0560
    4. NM_001177988.1NP_001171459.1  zinc finger MYM-type protein 3 isoform 5

      See identical proteins and their annotated locations for NP_001171459.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (5) lacks an alternate in-frame exon in the 5' coding region and differs in the 3' coding region and UTR compared to variant 1. The resulting protein (isoform 5) is shorter and has a distinct C-terminus compared to isoform 1.
      Source sequence(s)
      AK082075, AL831722, CB519077
      Consensus CDS
      CCDS53153.1
      UniProtKB/TrEMBL
      Q32P02
      Related
      ENSMUSP00000112399.2, ENSMUST00000118092.8
    5. NM_019831.3NP_062805.1  zinc finger MYM-type protein 3 isoform 1

      See identical proteins and their annotated locations for NP_062805.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
      Source sequence(s)
      AL831722
      Consensus CDS
      CCDS30315.1
      UniProtKB/Swiss-Prot
      Q9JLM4
      UniProtKB/TrEMBL
      B1AXS5
      Related
      ENSMUSP00000068197.4, ENSMUST00000063577.10
      Conserved Domains (4) summary
      smart00746
      Location:313349
      TRASH; metallochaperone-like domain
      PHA03307
      Location:2306
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:495534
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:11921353
      DUF3504; Domain of unknown function (DUF3504)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      100447990..100464986 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036162041.1XP_036017934.1  zinc finger MYM-type protein 3 isoform X4

      Conserved Domains (4) summary
      smart00746
      Location:354390
      TRASH; metallochaperone-like domain
      PHA03307
      Location:39347
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:536575
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:12201387
      DUF3504; Domain of unknown function (DUF3504)
    2. XM_006528162.4XP_006528225.1  zinc finger MYM-type protein 3 isoform X3

      Conserved Domains (4) summary
      smart00746
      Location:356392
      TRASH; metallochaperone-like domain
      PHA03307
      Location:39349
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:538577
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:12281389
      DUF3504; Domain of unknown function (DUF3504)
    3. XM_006528160.3XP_006528223.1  zinc finger MYM-type protein 3 isoform X1

      Conserved Domains (4) summary
      smart00746
      Location:356392
      TRASH; metallochaperone-like domain
      PHA03307
      Location:39349
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:538577
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:12351396
      DUF3504; Domain of unknown function (DUF3504)
    4. XM_036162042.1XP_036017935.1  zinc finger MYM-type protein 3 isoform X7

      Conserved Domains (4) summary
      smart00746
      Location:313349
      TRASH; metallochaperone-like domain
      PHA03307
      Location:2306
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:495534
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:11791346
      DUF3504; Domain of unknown function (DUF3504)
    5. XM_036162043.1XP_036017936.1  zinc finger MYM-type protein 3 isoform X8

      Conserved Domains (4) summary
      smart00746
      Location:311347
      TRASH; metallochaperone-like domain
      PHA03307
      Location:2304
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:493532
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:11771344
      DUF3504; Domain of unknown function (DUF3504)
    6. XM_030251413.2XP_030107273.1  zinc finger MYM-type protein 3 isoform X6

      Conserved Domains (4) summary
      smart00746
      Location:311347
      TRASH; metallochaperone-like domain
      PHA03307
      Location:2304
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:493532
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:11901351
      DUF3504; Domain of unknown function (DUF3504)
    7. XM_006528165.4XP_006528228.1  zinc finger MYM-type protein 3 isoform X5

      See identical proteins and their annotated locations for XP_006528228.1

      UniProtKB/Swiss-Prot
      Q9JLM4
      UniProtKB/TrEMBL
      B1AXS5
      Conserved Domains (4) summary
      smart00746
      Location:313349
      TRASH; metallochaperone-like domain
      PHA03307
      Location:2306
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:495534
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:11921353
      DUF3504; Domain of unknown function (DUF3504)
    8. XM_036162047.1XP_036017940.1  zinc finger MYM-type protein 3 isoform X13

      Conserved Domains (2) summary
      pfam06467
      Location:77114
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:675842
      DUF3504; Domain of unknown function (DUF3504)
    9. XM_006528161.3XP_006528224.1  zinc finger MYM-type protein 3 isoform X2

      Conserved Domains (4) summary
      smart00746
      Location:354390
      TRASH; metallochaperone-like domain
      PHA03307
      Location:39347
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:536575
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:12331394
      DUF3504; Domain of unknown function (DUF3504)
    10. XM_006528168.4XP_006528231.1  zinc finger MYM-type protein 3 isoform X10

      Conserved Domains (3) summary
      smart00746
      Location:180216
      TRASH; metallochaperone-like domain
      pfam06467
      Location:362401
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:10591220
      DUF3504; Domain of unknown function (DUF3504)
    11. XM_006528167.4XP_006528230.1  zinc finger MYM-type protein 3 isoform X9

      Conserved Domains (3) summary
      smart00746
      Location:182218
      TRASH; metallochaperone-like domain
      pfam06467
      Location:364403
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:10611222
      DUF3504; Domain of unknown function (DUF3504)
    12. XM_030251414.2XP_030107274.1  zinc finger MYM-type protein 3 isoform X6

      Conserved Domains (4) summary
      smart00746
      Location:311347
      TRASH; metallochaperone-like domain
      PHA03307
      Location:2304
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:493532
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:11901351
      DUF3504; Domain of unknown function (DUF3504)
    13. XM_006528166.4XP_006528229.1  zinc finger MYM-type protein 3 isoform X5

      See identical proteins and their annotated locations for XP_006528229.1

      UniProtKB/Swiss-Prot
      Q9JLM4
      UniProtKB/TrEMBL
      B1AXS5
      Conserved Domains (4) summary
      smart00746
      Location:313349
      TRASH; metallochaperone-like domain
      PHA03307
      Location:2306
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:495534
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:11921353
      DUF3504; Domain of unknown function (DUF3504)
    14. XM_006528164.3XP_006528227.1  zinc finger MYM-type protein 3 isoform X5

      See identical proteins and their annotated locations for XP_006528227.1

      UniProtKB/Swiss-Prot
      Q9JLM4
      UniProtKB/TrEMBL
      B1AXS5
      Conserved Domains (4) summary
      smart00746
      Location:313349
      TRASH; metallochaperone-like domain
      PHA03307
      Location:2306
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:495534
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:11921353
      DUF3504; Domain of unknown function (DUF3504)
    15. XM_030251412.2XP_030107272.1  zinc finger MYM-type protein 3 isoform X6

      Conserved Domains (4) summary
      smart00746
      Location:311347
      TRASH; metallochaperone-like domain
      PHA03307
      Location:2304
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:493532
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:11901351
      DUF3504; Domain of unknown function (DUF3504)
    16. XM_030251417.2XP_030107277.1  zinc finger MYM-type protein 3 isoform X12

      Conserved Domains (3) summary
      smart00746
      Location:137173
      TRASH; metallochaperone-like domain
      pfam06467
      Location:319358
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:10161177
      DUF3504; Domain of unknown function (DUF3504)
    17. XM_011247650.4XP_011245952.1  zinc finger MYM-type protein 3 isoform X6

      See identical proteins and their annotated locations for XP_011245952.1

      UniProtKB/TrEMBL
      B1AXS7
      Related
      ENSMUSP00000113049.2, ENSMUST00000120107.8
      Conserved Domains (4) summary
      smart00746
      Location:311347
      TRASH; metallochaperone-like domain
      PHA03307
      Location:2304
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:493532
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:11901351
      DUF3504; Domain of unknown function (DUF3504)
    18. XM_030251419.1XP_030107279.1  zinc finger MYM-type protein 3 isoform X13

      Conserved Domains (2) summary
      pfam06467
      Location:77114
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:675842
      DUF3504; Domain of unknown function (DUF3504)
    19. XM_036162046.1XP_036017939.1  zinc finger MYM-type protein 3 isoform X13

      Conserved Domains (2) summary
      pfam06467
      Location:77114
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:675842
      DUF3504; Domain of unknown function (DUF3504)
    20. XM_030251421.2XP_030107281.1  zinc finger MYM-type protein 3 isoform X13

      Conserved Domains (2) summary
      pfam06467
      Location:77114
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:675842
      DUF3504; Domain of unknown function (DUF3504)
    21. XM_036162045.1XP_036017938.1  zinc finger MYM-type protein 3 isoform X13

      Conserved Domains (2) summary
      pfam06467
      Location:77114
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:675842
      DUF3504; Domain of unknown function (DUF3504)
    22. XM_030251420.1XP_030107280.1  zinc finger MYM-type protein 3 isoform X13

      Conserved Domains (2) summary
      pfam06467
      Location:77114
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:675842
      DUF3504; Domain of unknown function (DUF3504)
    23. XM_030251423.1XP_030107283.1  zinc finger MYM-type protein 3 isoform X13

      Conserved Domains (2) summary
      pfam06467
      Location:77114
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:675842
      DUF3504; Domain of unknown function (DUF3504)
    24. XM_030251418.1XP_030107278.1  zinc finger MYM-type protein 3 isoform X13

      Conserved Domains (2) summary
      pfam06467
      Location:77114
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:675842
      DUF3504; Domain of unknown function (DUF3504)
    25. XM_030251425.1XP_030107285.1  zinc finger MYM-type protein 3 isoform X13

      Conserved Domains (2) summary
      pfam06467
      Location:77114
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:675842
      DUF3504; Domain of unknown function (DUF3504)
    26. XM_011247651.4XP_011245953.2  zinc finger MYM-type protein 3 isoform X6

      Related
      ENSMUSP00000113225.2, ENSMUST00000121520.8
      Conserved Domains (4) summary
      smart00746
      Location:311347
      TRASH; metallochaperone-like domain
      PHA03307
      Location:2304
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:493532
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:11901351
      DUF3504; Domain of unknown function (DUF3504)
    27. XM_006528163.5XP_006528226.1  zinc finger MYM-type protein 3 isoform X5

      See identical proteins and their annotated locations for XP_006528226.1

      UniProtKB/Swiss-Prot
      Q9JLM4
      UniProtKB/TrEMBL
      B1AXS5
      Conserved Domains (4) summary
      smart00746
      Location:313349
      TRASH; metallochaperone-like domain
      PHA03307
      Location:2306
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam06467
      Location:495534
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:11921353
      DUF3504; Domain of unknown function (DUF3504)
    28. XM_030251424.2XP_030107284.1  zinc finger MYM-type protein 3 isoform X13

      Conserved Domains (2) summary
      pfam06467
      Location:77114
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:675842
      DUF3504; Domain of unknown function (DUF3504)
    29. XM_030251416.2XP_030107276.1  zinc finger MYM-type protein 3 isoform X12

      Conserved Domains (3) summary
      smart00746
      Location:137173
      TRASH; metallochaperone-like domain
      pfam06467
      Location:319358
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:10161177
      DUF3504; Domain of unknown function (DUF3504)
    30. XM_030251422.2XP_030107282.1  zinc finger MYM-type protein 3 isoform X13

      Conserved Domains (2) summary
      pfam06467
      Location:77114
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:675842
      DUF3504; Domain of unknown function (DUF3504)
    31. XM_006528169.5XP_006528232.1  zinc finger MYM-type protein 3 isoform X11

      Conserved Domains (3) summary
      smart00746
      Location:139175
      TRASH; metallochaperone-like domain
      pfam06467
      Location:321360
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:10181179
      DUF3504; Domain of unknown function (DUF3504)
    32. XM_036162044.1XP_036017937.1  zinc finger MYM-type protein 3 isoform X13

      Conserved Domains (2) summary
      pfam06467
      Location:77114
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam12012
      Location:675842
      DUF3504; Domain of unknown function (DUF3504)
    33. XM_006528170.3XP_006528233.1  zinc finger MYM-type protein 3 isoform X14

      Conserved Domains (1) summary
      PHA03247
      Location:46307
      PHA03247; large tegument protein UL36; Provisional
    34. XM_030251427.2XP_030107287.1  zinc finger MYM-type protein 3 isoform X15

    35. XM_030251426.2XP_030107286.1  zinc finger MYM-type protein 3 isoform X15

    36. XM_006528171.4XP_006528234.1  zinc finger MYM-type protein 3 isoform X15

      See identical proteins and their annotated locations for XP_006528234.1

      UniProtKB/TrEMBL
      Q32P02
      Related
      ENSMUSP00000113462.2, ENSMUST00000117637.8
      Conserved Domains (1) summary
      PRK10263
      Location:88316
      PRK10263; DNA translocase FtsK; Provisional

    RNA

    1. XR_004940355.1 RNA Sequence

    2. XR_004940356.1 RNA Sequence

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