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    Fkbpl FK506 binding protein-like [ Mus musculus (house mouse) ]

    Gene ID: 56299, updated on 27-Jan-2018

    Summary

    Official Symbol
    Fkbplprovided by MGI
    Official Full Name
    FK506 binding protein-likeprovided by MGI
    Primary source
    MGI:MGI:1932127
    See related
    Ensembl:ENSMUSG00000033739 Vega:OTTMUSG00000037080
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    NG7; DIR1; Wisp39; Ppiase-X
    Expression
    Broad expression in testis adult (RPKM 17.6), colon adult (RPKM 3.5) and 23 other tissues See more
    Orthologs

    Genomic context

    See Fkbpl in Genome Data Viewer
    Location:
    17; 17 B1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 17 NC_000083.6 (34639132..34647316)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (34781828..34783272)

    Chromosome 17 - NC_000083.6Genomic Context describing neighboring genes Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) Neighboring gene EGF-like domain 8 Neighboring gene palmitoyl-protein thioesterase 2 Neighboring gene proline-rich transmembrane protein 1 Neighboring gene activating transcription factor 6 beta Neighboring gene tenascin XB Neighboring gene cytochrome P450, family 21, subfamily a, polypeptide 2 pseudogene Neighboring gene complement component 4B (Chido blood group)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    regulation of angiogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of angiogenesis ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    regulation of blood vessel branching IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    extracellular region ISO
    Inferred from Sequence Orthology
    more info
    PubMed 

    General protein information

    Preferred Names
    FK506-binding protein-like
    Names
    WAF-1/CIP1 stabilizing protein 39
    immunophilin-like protein NG7
    NP_063926.1
    XP_006524724.1
    XP_006524725.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_019873.2NP_063926.1  FK506-binding protein-like

      Status: PROVISIONAL

      Source sequence(s)
      BC046338
      Consensus CDS
      CCDS28654.1
      UniProtKB/Swiss-Prot
      O35450
      Related
      ENSMUSP00000037273.8, OTTMUSP00000053247, ENSMUST00000036720.8, OTTMUST00000095427
      Conserved Domains (3) summary
      sd00006
      Location:208236
      TPR; TPR repeat [structural motif]
      pfam00515
      Location:285317
      TPR_1; Tetratricopeptide repeat
      pfam13414
      Location:252315
      TPR_11; TPR repeat

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000083.6 Reference GRCm38.p4 C57BL/6J

      Range
      34639132..34647316
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006524662.3XP_006524725.1  FK506-binding protein-like isoform X1

      UniProtKB/Swiss-Prot
      O35450
      Conserved Domains (3) summary
      sd00006
      Location:208236
      TPR; TPR repeat [structural motif]
      pfam00515
      Location:285317
      TPR_1; Tetratricopeptide repeat
      pfam13414
      Location:252315
      TPR_11; TPR repeat
    2. XM_006524661.3XP_006524724.1  FK506-binding protein-like isoform X1

      UniProtKB/Swiss-Prot
      O35450
      Conserved Domains (3) summary
      sd00006
      Location:208236
      TPR; TPR repeat [structural motif]
      pfam00515
      Location:285317
      TPR_1; Tetratricopeptide repeat
      pfam13414
      Location:252315
      TPR_11; TPR repeat

    Reference GRCm38.p4 129X1/SvJ

    Genomic

    1. NT_039662.3 Reference GRCm38.p4 129X1/SvJ

      Range
      893655..895099
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCm38.p4 NOD/MrkTac

    Genomic

    1. NT_187027.1 Reference GRCm38.p4 NOD/MrkTac

      Range
      964290..965734
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCm38.p4 NOD/ShiLtJ

    Genomic

    1. NT_187004.1 Reference GRCm38.p4 NOD/ShiLtJ

      Range
      964540..965984
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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