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    Btg4 B cell translocation gene 4 [ Mus musculus (house mouse) ]

    Gene ID: 56057, updated on 26-Feb-2019

    Summary

    Official Symbol
    Btg4provided by MGI
    Official Full Name
    B cell translocation gene 4provided by MGI
    Primary source
    MGI:MGI:1860140
    See related
    Ensembl:ENSMUSG00000032056
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    PC3B; C86116
    Expression
    Restricted expression toward testis adult (RPKM 2.3) See more
    Orthologs

    Genomic context

    See Btg4 in Genome Data Viewer
    Location:
    9; 9 A5.3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 9 NC_000075.6 (51102265..51119700)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (50924106..50927805)

    Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 32681 Neighboring gene layilin Neighboring gene RIKEN cDNA 4833427G06 gene Neighboring gene microRNA 34c Neighboring gene microRNA 34b Neighboring gene predicted gene, 32742 Neighboring gene POU domain, class 2, associating factor 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from BioSystems

    • RNA degradation, organism-specific biosystem (from KEGG)
      RNA degradation, organism-specific biosystemThe correct processing, quality control and turnover of cellular RNA molecules are critical to many aspects in the expression of genetic information. In eukaryotes, two major pathways of mRNA decay e...
    • RNA degradation, conserved biosystem (from KEGG)
      RNA degradation, conserved biosystemThe correct processing, quality control and turnover of cellular RNA molecules are critical to many aspects in the expression of genetic information. In eukaryotes, two major pathways of mRNA decay e...

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    negative regulation of cell proliferation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    negative regulation of mitotic cell cycle IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    negative regulation of mitotic cell cycle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    protein BTG4
    Names
    BTG family member 4
    protein PC3b

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_019493.4NP_062366.2  protein BTG4

      See identical proteins and their annotated locations for NP_062366.2

      Status: VALIDATED

      Source sequence(s)
      AK136149, AU023718
      Consensus CDS
      CCDS40629.1
      UniProtKB/Swiss-Prot
      O70552
      Related
      ENSMUSP00000110074.2, ENSMUST00000114431.3
      Conserved Domains (1) summary
      pfam07742
      Location:1115
      BTG; BTG family

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000075.6 Reference GRCm38.p4 C57BL/6J

      Range
      51102265..51119700
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006510500.2XP_006510563.1  protein BTG4 isoform X1

      See identical proteins and their annotated locations for XP_006510563.1

      UniProtKB/Swiss-Prot
      O70552
      Related
      ENSMUSP00000149181.1, ENSMUST00000213680.1
      Conserved Domains (1) summary
      pfam07742
      Location:1115
      BTG; BTG family
    2. XM_006510499.3XP_006510562.1  protein BTG4 isoform X1

      See identical proteins and their annotated locations for XP_006510562.1

      UniProtKB/Swiss-Prot
      O70552
      Conserved Domains (1) summary
      pfam07742
      Location:1115
      BTG; BTG family
    3. XM_017313490.1XP_017168979.1  protein BTG4 isoform X1

      UniProtKB/Swiss-Prot
      O70552
      Conserved Domains (1) summary
      pfam07742
      Location:1115
      BTG; BTG family
    4. XM_006510501.3XP_006510564.1  protein BTG4 isoform X1

      See identical proteins and their annotated locations for XP_006510564.1

      UniProtKB/Swiss-Prot
      O70552
      Conserved Domains (1) summary
      pfam07742
      Location:1115
      BTG; BTG family
    5. XM_006510502.2XP_006510565.1  protein BTG4 isoform X1

      See identical proteins and their annotated locations for XP_006510565.1

      UniProtKB/Swiss-Prot
      O70552
      Conserved Domains (1) summary
      pfam07742
      Location:1115
      BTG; BTG family
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