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    Fnbp4 formin binding protein 4 [ Mus musculus (house mouse) ]

    Gene ID: 55935, updated on 21-Feb-2019

    Summary

    Official Symbol
    Fnbp4provided by MGI
    Official Full Name
    formin binding protein 4provided by MGI
    Primary source
    MGI:MGI:1860513
    See related
    Ensembl:ENSMUSG00000008200
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    FBP30; Fnbp30; mKIAA1014
    Expression
    Ubiquitous expression in CNS E14 (RPKM 22.6), CNS E11.5 (RPKM 22.2) and 28 other tissues See more
    Orthologs

    Genomic context

    See Fnbp4 in Genome Data Viewer
    Location:
    2; 2 E1
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (90745370..90781021)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (90585527..90621178)

    Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 39871 Neighboring gene nucleoporin 160 Neighboring gene predicted gene, 39872 Neighboring gene ribosomal protein L30, pseudogene 3 Neighboring gene ATP/GTP binding protein-like 2 Neighboring gene predicted gene 13772 Neighboring gene mitochondrial carrier 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Chemically induced (ENU) (1) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    nuclear speck ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    formin-binding protein 4
    Names
    formin binding protein 30

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_018828.3NP_061298.2  formin-binding protein 4

      Status: VALIDATED

      Source sequence(s)
      AL714026
      Consensus CDS
      CCDS16414.1
      Related
      ENSMUSP00000013759.5, ENSMUST00000013759.5

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

      Range
      90745370..90781021
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006499919.2XP_006499982.1  formin-binding protein 4 isoform X1

      Conserved Domains (2) summary
      cd00201
      Location:652683
      WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
      pfam00397
      Location:269296
      WW; WW domain

    RNA

    1. XR_866324.1 RNA Sequence

    2. XR_001783149.1 RNA Sequence

    3. XR_374493.2 RNA Sequence

      Related
      ENSMUST00000123314.7
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