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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001286702.2 → NP_001273631.1 armadillo repeat-containing protein 1 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and lacks an exon in the central coding region compared to variant 1. These differences cause translation initiation at an alternate AUG and result in an isoform (2) with a shorter and distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AA808041, AC055822, AC100814, AK304463, DC349250
- Consensus CDS
-
CCDS69490.1
- UniProtKB/Swiss-Prot
-
Q9NVT9
- Related
- ENSP00000388572.2, ENST00000458464.3
-
NM_018120.6 → NP_060590.1 armadillo repeat-containing protein 1 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AA808041, AC055822, AC100814, BC018846, DC349250
- Consensus CDS
-
CCDS6181.1
- UniProtKB/Swiss-Prot
- B4E2W7, Q9H018, Q9H820, Q9NVT9
- Related
- ENSP00000276569.3, ENST00000276569.8
- Conserved Domains (1) summary
-
- pfam00514
Location:27 → 67
- Arm; Armadillo/beta-catenin-like repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000008.11 Reference GRCh38.p14 Primary Assembly
- Range
-
65602458..65634177 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005251264.3 → XP_005251321.1 armadillo repeat-containing protein 1 isoform X2
- Conserved Domains (1) summary
-
- cd00020
Location:21 → 91
- ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
-
XM_047421927.1 → XP_047277883.1 armadillo repeat-containing protein 1 isoform X2
-
XM_047421926.1 → XP_047277882.1 armadillo repeat-containing protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B4E2W7, Q9H018, Q9H820, Q9NVT9
Alternate T2T-CHM13v2.0
Genomic
-
NC_060932.1 Alternate T2T-CHM13v2.0
- Range
-
66028123..66059853 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054360751.1 → XP_054216726.1 armadillo repeat-containing protein 1 isoform X2
-
XM_054360752.1 → XP_054216727.1 armadillo repeat-containing protein 1 isoform X2
-
XM_054360750.1 → XP_054216725.1 armadillo repeat-containing protein 1 isoform X1
- UniProtKB/Swiss-Prot
- B4E2W7, Q9H018, Q9H820, Q9NVT9