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    Ncapg non-SMC condensin I complex, subunit G [ Mus musculus (house mouse) ]

    Gene ID: 54392, updated on 23-Jun-2021

    Summary

    Official Symbol
    Ncapgprovided by MGI
    Official Full Name
    non-SMC condensin I complex, subunit Gprovided by MGI
    Primary source
    MGI:MGI:1930197
    See related
    Ensembl:ENSMUSG00000015880
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hca; Hcapg; MFT.M05.13; 5730507H05Rik
    Expression
    Biased expression in liver E14 (RPKM 14.6), CNS E11.5 (RPKM 13.6) and 10 other tissues See more
    Orthologs
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    Genomic context

    See Ncapg in Genome Data Viewer
    Location:
    5; 5 B3
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (45827212..45858491)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (45669891..45700547)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (46061164..46091786)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1600023N17 gene Neighboring gene DDB1 and CUL4 associated factor 16 pseudogene Neighboring gene ligand dependent nuclear receptor corepressor-like Neighboring gene predicted gene 3414 Neighboring gene SCAN domain containing 3 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Clone Names

    • MGC169458

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in mitotic chromosome condensation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in mitotic chromosome condensation ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in condensed chromosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in condensed chromosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in condensed chromosome, centromeric region IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of condensin complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of condensin complex ISO
    Inferred from Sequence Orthology
    more info
     
    part_of condensin complex TAS
    Traceable Author Statement
    more info
    PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    condensin complex subunit 3
    Names
    chromosome condensation protein G
    on-SMC condensin I complex, subunit G

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_019438.1NP_062311.1  condensin complex subunit 3

      Status: PROVISIONAL

      Source sequence(s)
      AC093341, AK017756, AK136254, CJ068152, CX564513
      Consensus CDS
      CCDS51498.1
      UniProtKB/TrEMBL
      E9PWG6
      Related
      ENSMUSP00000112871.2, ENSMUST00000117396.3
      Conserved Domains (3) summary
      pfam12719
      Location:557859
      Cnd3; Nuclear condensing complex subunits, C-term domain
      pfam13646
      Location:103204
      HEAT_2; HEAT repeats
      sd00044
      Location:212234
      HEAT; HEAT repeat [structural motif]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      45827212..45858491
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004942540.1 RNA Sequence

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