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    Rpp30 ribonuclease P/MRP 30 subunit [ Mus musculus (house mouse) ]

    Gene ID: 54364, updated on 8-Aug-2021

    Summary

    Official Symbol
    Rpp30provided by MGI
    Official Full Name
    ribonuclease P/MRP 30 subunitprovided by MGI
    Primary source
    MGI:MGI:1859683
    See related
    Ensembl:ENSMUSG00000024800
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Rn; TSG1; TSG15; Rnasep2
    Expression
    Broad expression in CNS E11.5 (RPKM 13.6), liver E14 (RPKM 10.6) and 20 other tissues See more
    Orthologs
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    Genomic context

    See Rpp30 in Genome Data Viewer
    Location:
    19; 19 C2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (36061089..36082173)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (36083689..36104773)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (36158206..36179263)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA A830019P07 gene Neighboring gene peroxiredoxin 3 pseudogene Neighboring gene 5-hydroxytryptamine (serotonin) receptor 7 Neighboring gene ankyrin repeat domain 1 (cardiac muscle) Neighboring gene predicted gene, 32081 Neighboring gene predicted gene, 32027

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables ribonuclease P RNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    contributes_to ribonuclease P activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in RNA phosphodiester bond hydrolysis, endonucleolytic IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within rRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in tRNA 5'-leader removal ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in tRNA processing IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of multimeric ribonuclease P complex ISO
    Inferred from Sequence Orthology
    more info
     
    part_of nucleolar ribonuclease P complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    part_of ribonuclease MRP complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    ribonuclease P protein subunit p30
    Names
    RNase P subunit 2
    RNaseP protein p30
    ribonuclease P/MRP 30kDa subunit
    ribonuclease P2
    NP_062301.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_019428.3NP_062301.3  ribonuclease P protein subunit p30

      See identical proteins and their annotated locations for NP_062301.3

      Status: VALIDATED

      Source sequence(s)
      AI850358, AK004137, AK169253, CN722047
      Consensus CDS
      CCDS29770.1
      UniProtKB/Swiss-Prot
      O88796
      UniProtKB/TrEMBL
      Q3TF81
      Related
      ENSMUSP00000025714.8, ENSMUST00000025714.9
      Conserved Domains (1) summary
      pfam01876
      Location:21224
      RNase_P_p30; RNase P subunit p30

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      36061089..36082173
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_386495.3 RNA Sequence

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